Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC087272.1-201ENST00000523624 533 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 ATP5F1P5-201ENST00000526403 760 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.95□□□□□ -2.1
UBFD1O14562 ZNF971P-201ENST00000562068 1249 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 LINC00557-201ENST00000563184 1279 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 AC093519.1-201ENST00000566109 298 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.95□□□□□ -2.1
UBFD1O14562 AC027309.3-201ENST00000623419 351 ntBASIC1.95□□□□□ -2.1
UBFD1O14562 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
UBFD1O14562 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
UBFD1O14562 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
UBFD1O14562 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
UBFD1O14562 RNU6-882P-201ENST00000391025 103 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 RNU6-932P-201ENST00000391108 106 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 RNU2-2P-201ENST00000410396 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AL513331.1-201ENST00000411908 397 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.94□□□□□ -2.1
UBFD1O14562 AC092634.6-201ENST00000418558 192 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AL121882.1-201ENST00000422893 417 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.94□□□□□ -2.1
UBFD1O14562 TMEM167AP1-201ENST00000423409 219 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.94□□□□□ -2.1
UBFD1O14562 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.94□□□□□ -2.1
UBFD1O14562 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.94□□□□□ -2.1
UBFD1O14562 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.94□□□□□ -2.1
UBFD1O14562 RPL23AP42-201ENST00000471152 471 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.94□□□□□ -2.1
UBFD1O14562 RPL9P6-201ENST00000492764 598 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.94□□□□□ -2.1
UBFD1O14562 AC104090.1-201ENST00000506341 1171 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AC109464.2-201ENST00000510242 943 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AC113155.1-201ENST00000511141 769 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.94□□□□□ -2.1
UBFD1O14562 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBFD1O14562 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.94□□□□□ -2.1
UBFD1O14562 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.94□□□□□ -2.1
UBFD1O14562 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBFD1O14562 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBFD1O14562 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.94□□□□□ -2.1
UBFD1O14562 OR4K8P-201ENST00000578842 1048 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AC090616.3-201ENST00000582184 217 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.94□□□□□ -2.1
UBFD1O14562 RPS15AP11-201ENST00000594193 385 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AL671309.1-201ENST00000603750 544 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AC002487.1-201ENST00000604565 994 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBFD1O14562 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.94□□□□□ -2.1
UBFD1O14562 AP001521.1-201ENST00000609150 300 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.15-201ENST00000611544 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.16-201ENST00000613119 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.12-201ENST00000613778 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.20-201ENST00000613956 192 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 MIR8084-201ENST00000614105 89 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.9-201ENST00000615427 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.11-201ENST00000616345 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.2-201ENST00000616535 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.3-201ENST00000617785 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.19-201ENST00000618602 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 RNU2-1-201ENST00000618664 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.6-201ENST00000619225 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.5-201ENST00000619465 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 U2.10-201ENST00000620268 191 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 YWHAEP7-203ENST00000622054 312 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 AC080188.3-201ENST00000624842 748 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
UBFD1O14562 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
UBFD1O14562 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
UBFD1O14562 AC009812.4-201ENST00000569134 1805 ntBASIC1.94□□□□□ -2.1
UBFD1O14562 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBFD1O14562 GDI2P1-201ENST00000429312 1336 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 ZNF72P-201ENST00000425869 1908 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 MTCO1P9-201ENST00000505577 1534 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 ZNF519P1-201ENST00000449011 1626 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 RNU6-839P-201ENST00000363347 108 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 RNA5SP99-201ENST00000364020 114 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 RNU6-270P-201ENST00000364131 105 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 RNU6-173P-201ENST00000364215 104 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 SET-203ENST00000372688 801 ntTSL 2 BASIC1.93□□□□□ -2.1
UBFD1O14562 MIR217-201ENST00000384817 110 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 MIR764-201ENST00000390811 85 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 RN7SKP32-201ENST00000410167 303 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 RPL17P12-201ENST00000413391 526 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.93□□□□□ -2.1
UBFD1O14562 BX664727.1-201ENST00000416024 466 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.93□□□□□ -2.1
UBFD1O14562 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AL590762.3-201ENST00000436372 640 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.93□□□□□ -2.1
UBFD1O14562 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.93□□□□□ -2.1
UBFD1O14562 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.93□□□□□ -2.1
UBFD1O14562 AC090515.1-201ENST00000465295 476 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 MTAPP1-201ENST00000489154 819 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.93□□□□□ -2.1
UBFD1O14562 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.93□□□□□ -2.1
UBFD1O14562 SNORA48.10-201ENST00000516965 160 ntBASIC1.93□□□□□ -2.1
UBFD1O14562 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.93□□□□□ -2.1
UBFD1O14562 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 246.1 ms