Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 Y_RNA.193-201ENST00000363979 102 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 RNU1-63P-201ENST00000383902 164 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 RNU6-505P-201ENST00000384427 107 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 RNU6-601P-201ENST00000384540 107 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 EIF4E2P1-201ENST00000393781 255 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AL360182.1-201ENST00000397433 468 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 TOMM22P1-201ENST00000418578 312 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AL137014.1-201ENST00000420490 1226 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC005019.1-201ENST00000436455 431 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC016696.1-201ENST00000446949 318 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 MTCO3P10-201ENST00000455912 772 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 RN7SL329P-201ENST00000467740 299 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC008638.1-201ENST00000506035 866 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 OR7H2P-201ENST00000513483 306 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 RNU2-58P-201ENST00000516403 183 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 SCARNA21.2-201ENST00000516600 166 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 RNA5SP309-201ENST00000516670 106 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC090151.1-201ENST00000520784 730 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC008269.2-201ENST00000561915 1105 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC138761.3-201ENST00000579993 334 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AF038458.1-201ENST00000588406 262 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC023043.2-201ENST00000589678 1026 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC104662.1-201ENST00000604448 511 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AL031176.1-201ENST00000604554 466 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC005014.2-201ENST00000607795 599 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC006023.2-201ENST00000609916 167 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AL442067.1-201ENST00000613261 223 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 AC055839.1-201ENST00000634467 498 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 BDP1P-201ENST00000582658 1990 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.61□□□□□ -1.83
CGB1A6NKQ9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CGB1A6NKQ9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AL049641.1-201ENST00000441055 1948 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AL133383.2-201ENST00000622958 2336 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 SDAD1P1-202ENST00000524156 2051 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AC125257.1-201ENST00000560400 2930 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 SNORD115-7-201ENST00000365306 82 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 SNORD3H-201ENST00000384486 214 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 MIR659-201ENST00000384963 97 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 MT-TR-201ENST00000387439 65 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 UBE2V1P2-201ENST00000397758 440 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 MRPL42P3-201ENST00000401492 326 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 RNU4-46P-201ENST00000410818 138 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 POLHP1-201ENST00000411806 470 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AC009237.10-201ENST00000414112 510 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 MCFD2P1-201ENST00000417812 300 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 SKA2P1-201ENST00000425592 390 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AC020550.1-201ENST00000447385 163 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 RPL23AP65-201ENST00000475608 468 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 RPL7P43-201ENST00000478876 753 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AC108022.1-201ENST00000493466 478 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AC079140.5-201ENST00000507882 310 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 NDUFB5P1-201ENST00000508134 564 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 MTND4LP22-201ENST00000508209 276 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 FTH1P9-201ENST00000513251 355 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 FAM60DP-201ENST00000524174 632 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AP001922.4-201ENST00000526967 290 ntBASIC3.6□□□□□ -1.83
CGB1A6NKQ9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.6□□□□□ -1.83
CGB1A6NKQ9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms