Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC104454.1-201ENST00000421341 1401 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC004925.1-201ENST00000624256 2706 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 RNU6-28P-201ENST00000362378 107 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 RNU6-462P-201ENST00000362659 105 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 RNA5SP68-201ENST00000363885 119 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 RAP1BP1-201ENST00000412709 553 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC080125.1-201ENST00000414888 684 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC005005.2-201ENST00000420779 380 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AL117351.1-201ENST00000438864 766 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 SDCBPP1-201ENST00000440192 890 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AL109741.2-201ENST00000455561 343 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 RPS3P1-201ENST00000456781 192 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 RPL9P33-201ENST00000484311 566 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC119751.5-201ENST00000514077 770 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 RNU6-1129P-201ENST00000515964 104 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 RNA5SP76-201ENST00000516277 87 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC090888.2-201ENST00000559765 1144 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC008751.2-201ENST00000597885 980 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC018714.1-201ENST00000605028 208 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AL607023.1-201ENST00000620045 248 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AC087359.1-201ENST00000508335 1740 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 AL136360.1-201ENST00000503377 1900 ntBASIC3.01□□□□□ -1.93
RNF41Q9H4P4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RNF41Q9H4P4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3□□□□□ -1.93
RNF41Q9H4P4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3□□□□□ -1.93
RNF41Q9H4P4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3□□□□□ -1.93
RNF41Q9H4P4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3□□□□□ -1.93
RNF41Q9H4P4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNF41Q9H4P4 HMGN2P20-201ENST00000437531 273 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3□□□□□ -1.93
RNF41Q9H4P4 SSXP4-201ENST00000451349 245 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3□□□□□ -1.93
RNF41Q9H4P4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3□□□□□ -1.93
RNF41Q9H4P4 SRIP1-201ENST00000489235 288 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 AL024509.2-201ENST00000493462 493 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 AC017037.2-201ENST00000513850 890 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 RN7SKP282-201ENST00000516824 299 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 SNORA31.26-201ENST00000517250 137 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 NAP1L1P1-201ENST00000524793 1063 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 AC087276.1-201ENST00000529659 480 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 ELOCP31-201ENST00000540463 467 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 OR6C7P-201ENST00000547875 934 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 CR383656.7-201ENST00000548164 174 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3□□□□□ -1.93
RNF41Q9H4P4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3□□□□□ -1.93
RNF41Q9H4P4 AL353778.1-201ENST00000603149 408 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RNF41Q9H4P4 U4.3-201ENST00000621047 82 ntBASIC3□□□□□ -1.93
RNF41Q9H4P4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
RNF41Q9H4P4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3□□□□□ -1.93
RNF41Q9H4P4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 RNU6-289P-201ENST00000364093 107 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 RNU6-1181P-201ENST00000384191 106 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 MIR135A2-201ENST00000384854 100 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 SAR1AP2-201ENST00000392696 594 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 MIR1289-1-201ENST00000408836 144 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 RPL7P10-201ENST00000417407 739 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 AC098592.1-201ENST00000419352 333 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 AL022400.1-201ENST00000423946 935 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 RPL7P46-201ENST00000425129 740 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 AC092447.3-201ENST00000426027 686 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 MTCO1P39-201ENST00000426148 480 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 AL035407.1-201ENST00000429211 571 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 HMGB1P15-201ENST00000453854 435 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 ARPC3P2-201ENST00000457786 533 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 RPL21P104-201ENST00000464143 478 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 AC004263.1-201ENST00000479327 332 ntBASIC2.99□□□□□ -1.93
RNF41Q9H4P4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.99□□□□□ -1.93
RNF41Q9H4P4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms