Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AL359704.1-201ENST00000411586 781 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 HMGN1P24-201ENST00000412282 298 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AC063979.1-201ENST00000415539 377 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 ZNF90P2-204ENST00000419323 1075 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AC012065.2-201ENST00000421295 375 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AC092832.1-201ENST00000422934 400 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 HMGB3P21-201ENST00000452483 547 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 RPL39P36-201ENST00000490784 156 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 FCF1P8-201ENST00000510322 597 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 RNU6-835P-201ENST00000516974 104 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AC007621.1-201ENST00000604544 437 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AC113194.1-201ENST00000606037 500 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 MIR98-201ENST00000606724 119 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AL359697.1-201ENST00000624879 587 ntBASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PHACTR3Q96KR7 AC092125.1-201ENST00000562568 1995 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC092326.2-201ENST00000624772 1561 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 RNU6-28P-201ENST00000362378 107 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 RNU6-451P-201ENST00000362921 107 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 RNY3P3-201ENST00000363816 102 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 RNU6-169P-201ENST00000365336 107 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 Y_RNA.548-201ENST00000384656 105 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC002075.2-201ENST00000425207 252 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL035410.1-201ENST00000427409 427 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 CALM1P1-201ENST00000442082 433 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 USP9YP15-201ENST00000442391 422 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL357552.1-201ENST00000445254 415 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC083798.1-201ENST00000472671 131 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC023194.1-201ENST00000493084 308 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC093767.1-201ENST00000504523 156 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 RNU6-1281P-201ENST00000516223 105 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL356432.3-201ENST00000568952 465 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC005261.5-201ENST00000596280 355 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL162413.1-201ENST00000603198 110 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 Y_RNA.804-201ENST00000615262 101 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 MIR3662-201ENST00000637030 95 ntBASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PHACTR3Q96KR7 MTND4P29-201ENST00000503122 1372 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 RNU6-1322P-201ENST00000364309 107 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 Y_RNA.234-201ENST00000364409 97 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 RNU6-359P-201ENST00000365466 108 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 RNU6-877P-201ENST00000383868 107 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 SSXP10-201ENST00000402595 565 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 AL356776.1-201ENST00000406574 447 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 AC127391.1-201ENST00000411737 98 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 RPL31P2-201ENST00000413849 377 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 MTATP6P18-201ENST00000417994 673 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 RPS29P31-201ENST00000446147 164 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 AL162388.1-201ENST00000450912 352 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 AL121877.1-201ENST00000453704 622 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 RPS20P32-201ENST00000456044 356 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 AC022364.2-201ENST00000457963 554 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 RPS4XP2-201ENST00000458402 793 ntBASIC4.44□□□□□ -1.7
PHACTR3Q96KR7 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms