Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 RPS15AP12-201ENST00000419498 388 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 NDUFB4P7-201ENST00000423198 363 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 MTCO2P16-201ENST00000436962 677 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 AC009961.3-201ENST00000449832 765 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 AC140076.1-201ENST00000449897 361 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 ACTR3P3-201ENST00000480448 893 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 RNU6-711P-201ENST00000517255 106 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 NRON-201ENST00000517270 370 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 AC007115.1-201ENST00000546853 234 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 RPL21P5-201ENST00000554662 472 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 MIR5685-201ENST00000579080 79 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 AC067852.3-201ENST00000589177 561 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 BNIP3P8-201ENST00000597863 560 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 AL133393.1-201ENST00000603277 287 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 AC006338.1-201ENST00000618453 749 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 SDAD1P2-201ENST00000441308 2028 ntBASIC4.39□□□□□ -1.71
CCDC136Q96JN2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC136Q96JN2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC032011.1-201ENST00000611703 1549 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC136Q96JN2 RNU1-64P-201ENST00000365443 163 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 MIR325-201ENST00000385260 98 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC136Q96JN2 RPS20P20-201ENST00000460498 340 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC117522.2-201ENST00000510049 657 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 SNORA70.18-201ENST00000516696 98 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 PAICSP4-201ENST00000517543 1253 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 RANP9-201ENST00000519957 271 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC007991.1-201ENST00000522680 631 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC124947.2-202ENST00000552735 133 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC136Q96JN2 DPPA3P3-201ENST00000603842 430 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC135507.1-201ENST00000607214 561 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC103710.1-201ENST00000610003 901 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC008250.2-201ENST00000615261 205 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 uc_338.12-201ENST00000616344 181 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC002076.2-201ENST00000617362 122 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AC119674.1-207ENST00000641355 633 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 AL161431.1-201ENST00000618966 4205 ntBASIC4.38□□□□□ -1.71
CCDC136Q96JN2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 RNA5SP383-201ENST00000362934 120 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 SNORA40.3-201ENST00000390964 122 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 FAT1P1-201ENST00000406588 507 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 HSPE1P1-201ENST00000421494 318 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AC019097.1-201ENST00000424783 735 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 HMGB3P11-201ENST00000440127 604 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AC008264.1-201ENST00000447612 367 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 FTH1P2-201ENST00000466086 412 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 MTND1P3-201ENST00000484956 952 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 MTND4LP31-201ENST00000514859 294 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 RNA5SP385-201ENST00000515947 110 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 SNORA31.1-201ENST00000515993 133 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 SNORA31.5-201ENST00000516190 133 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AP003467.2-201ENST00000520175 319 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 PIGPP4-201ENST00000584447 307 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AC093227.2-201ENST00000589357 285 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 RNU6-87P-201ENST00000607561 108 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AC107294.3-201ENST00000609211 526 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AC013476.2-201ENST00000614456 459 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 SNHG22-203ENST00000617833 660 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AC006111.3-201ENST00000622137 383 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 AC026422.1-201ENST00000623961 452 ntBASIC4.37□□□□□ -1.71
CCDC136Q96JN2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC136Q96JN2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC136Q96JN2 OR1S2-201ENST00000302592 978 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 SNORD116-9-201ENST00000384000 95 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 SNORD116-3-201ENST00000384287 95 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 SNORD116-7-201ENST00000384404 95 ntBASIC4.36□□□□□ -1.71
CCDC136Q96JN2 SNORD116-5-201ENST00000384462 95 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms