Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 MRPL50P4-201ENST00000446432 475 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT40Q6A162 RPS4XP10-201ENST00000465034 731 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.48□□□□□ -1.69
KRT40Q6A162 SNORD60.2-201ENST00000516883 86 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 AC026403.1-201ENST00000518938 295 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 AC107953.1-201ENST00000522216 297 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.48□□□□□ -1.69
KRT40Q6A162 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.48□□□□□ -1.69
KRT40Q6A162 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.48□□□□□ -1.69
KRT40Q6A162 AL121992.2-201ENST00000606262 256 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.48□□□□□ -1.69
KRT40Q6A162 AC245517.5-201ENST00000611529 162 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 AL034408.1-202ENST00000636088 415 ntBASIC4.48□□□□□ -1.69
KRT40Q6A162 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
KRT40Q6A162 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KRT40Q6A162 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
KRT40Q6A162 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.48□□□□□ -1.69
KRT40Q6A162 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRT40Q6A162 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
KRT40Q6A162 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT40Q6A162 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KRT40Q6A162 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
KRT40Q6A162 AC011155.1-201ENST00000316512 456 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 Y_RNA.58-201ENST00000362807 102 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 RNU5E-8P-201ENST00000363502 116 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 Y_RNA.154-201ENST00000363624 102 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 RNU5A-8P-201ENST00000364102 114 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 Y_RNA.255-201ENST00000364581 97 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 RNY3P1-201ENST00000365085 102 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 RNY3-201ENST00000365484 102 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 Y_RNA.490-201ENST00000384413 102 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 RNU2-15P-201ENST00000410692 191 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 RPL31P2-201ENST00000413849 377 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 AL354751.2-201ENST00000415471 210 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 RPS15AP40-201ENST00000419621 391 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT40Q6A162 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT40Q6A162 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT40Q6A162 FTH1P25-201ENST00000447665 469 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 AC073415.1-201ENST00000449240 153 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT40Q6A162 RPS20P21-201ENST00000466859 343 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT40Q6A162 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT40Q6A162 MTCO3P44-201ENST00000510977 541 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 RNU6-277P-201ENST00000516272 106 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT40Q6A162 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT40Q6A162 AC103843.2-201ENST00000530523 682 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.47□□□□□ -1.69
KRT40Q6A162 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.47□□□□□ -1.69
KRT40Q6A162 AC005498.1-201ENST00000592125 465 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 AC005255.1-201ENST00000593748 216 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 AL592436.1-201ENST00000605135 558 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.47□□□□□ -1.69
KRT40Q6A162 AL138713.1-201ENST00000624026 2130 ntBASIC4.47□□□□□ -1.69
KRT40Q6A162 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
KRT40Q6A162 AL356489.2-201ENST00000566968 3528 ntBASIC4.46□□□□□ -1.69
KRT40Q6A162 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.46□□□□□ -1.7
KRT40Q6A162 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
KRT40Q6A162 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
KRT40Q6A162 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRT40Q6A162 AC007529.1-201ENST00000418574 2178 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AC073346.2-201ENST00000624724 2058 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KRT40Q6A162 Y_RNA.111-201ENST00000363248 100 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 RNU6-996P-201ENST00000365438 107 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 U8.11-201ENST00000384699 133 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 U8.12-201ENST00000384701 133 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 RNU6-606P-201ENST00000384721 111 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 MIR30B-201ENST00000384850 88 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 MIR34B-201ENST00000385076 84 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 MIR199A2-201ENST00000385289 110 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AL122016.1-201ENST00000403365 367 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 MTCYBP8-201ENST00000422855 651 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 RPS20P5-201ENST00000434808 360 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 RAC1P7-201ENST00000445367 377 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.46□□□□□ -1.7
KRT40Q6A162 AC140076.1-201ENST00000449897 361 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AC007967.1-201ENST00000455422 1159 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 SNORD121B-201ENST00000458838 81 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 U8.18-201ENST00000459285 133 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 RPL21P11-201ENST00000461458 483 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 HMGN1P10-201ENST00000474557 553 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AC078785.3-201ENST00000476607 425 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 NIPA2P2-201ENST00000496376 1083 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 RPL38P4-201ENST00000502376 214 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.46□□□□□ -1.7
KRT40Q6A162 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT40Q6A162 HMGN1P13-201ENST00000505795 138 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 SUMO2P20-201ENST00000520803 283 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT40Q6A162 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT40Q6A162 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT40Q6A162 SETP2-201ENST00000553886 926 ntBASIC4.46□□□□□ -1.7
KRT40Q6A162 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT40Q6A162 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.46□□□□□ -1.7
KRT40Q6A162 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms