Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RNA5SP97-201ENST00000365006 84 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 RNU5E-6P-201ENST00000365574 115 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 RNU6-1042P-201ENST00000384204 107 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 FAT1P1-201ENST00000406588 507 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 MTND3P17-201ENST00000416968 344 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 BX295541.1-201ENST00000417774 250 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 PIGFP2-201ENST00000421400 651 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 RAC1P6-201ENST00000423911 575 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 USP9YP36-201ENST00000424581 829 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 FCF1P1-201ENST00000432690 571 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 MTATP6P30-201ENST00000443540 664 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 CBWD4P-201ENST00000445695 655 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 RNA5SP310-201ENST00000459084 116 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC38Q502W7 RN7SL432P-201ENST00000484057 298 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 KCTD9P5-201ENST00000504141 1170 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 RNU7-51P-201ENST00000516560 62 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 RNU6-405P-201ENST00000516637 110 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 RNU6-430P-201ENST00000517078 107 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 MTCO2P4-201ENST00000517968 247 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC022616.3-201ENST00000523940 148 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC087883.1-201ENST00000551882 391 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 RPS3AP4-201ENST00000555161 764 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC002545.1-201ENST00000592511 181 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC098614.4-201ENST00000607601 462 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 HULC.1-201ENST00000612720 240 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC091834.1-201ENST00000614543 472 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC38Q502W7 AC244100.1-202ENST00000621554 382 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 RNA5SP196-201ENST00000625967 102 ntBASIC3.85□□□□□ -1.79
CCDC38Q502W7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC38Q502W7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC38Q502W7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC38Q502W7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC38Q502W7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CCDC38Q502W7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC38Q502W7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC38Q502W7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
CCDC38Q502W7 RNU1-64P-201ENST00000365443 163 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 NDUFS5P1-201ENST00000405668 289 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 MTHFD2P2-201ENST00000407725 247 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 RN7SKP27-201ENST00000410684 333 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 RNU2-16P-201ENST00000410712 136 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 SNORA57.3-201ENST00000411095 141 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 ZNF90P2-204ENST00000419323 1075 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 AC091390.3-201ENST00000426478 338 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC38Q502W7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC38Q502W7 SNRPGP6-201ENST00000451124 220 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 TPT1P7-201ENST00000458300 517 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 RPS20P22-201ENST00000473700 357 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC38Q502W7 RNU6-927P-201ENST00000516199 100 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 OR5G4P-201ENST00000525251 760 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC38Q502W7 MIR4738-201ENST00000579134 87 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 AC068790.2-201ENST00000602601 557 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 AL161729.4-201ENST00000604650 476 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 AC005332.10-201ENST00000612725 619 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 AC002076.2-201ENST00000617362 122 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 MIR6875-201ENST00000617506 72 ntBASIC3.84□□□□□ -1.79
CCDC38Q502W7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC38Q502W7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC38Q502W7 CR848007.1-201ENST00000442354 1699 ntBASIC3.84□□□□□ -1.8
CCDC38Q502W7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC091152.2-201ENST00000591628 2569 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC38Q502W7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC38Q502W7 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC38Q502W7 RNU6-213P-201ENST00000384051 104 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 SNORA1.3-201ENST00000384676 136 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 OR2AS1P-201ENST00000427827 319 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 RPL31P35-201ENST00000431058 377 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 RPS24P1-201ENST00000438550 371 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 HSFY6P-201ENST00000445573 403 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 PCBP2P3-201ENST00000509726 843 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 TTC39CP1-201ENST00000512513 755 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC38Q502W7 RNA5SP164-201ENST00000516533 110 ntBASIC3.83□□□□□ -1.8
CCDC38Q502W7 RNU6-1092P-201ENST00000516955 87 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 535.3 ms