Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.63□□□□□ -2.15
CCDC58Q4VC31 RNU6-1159P-201ENST00000362933 107 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 U8.3-201ENST00000363321 132 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 SNORA64-201ENST00000384674 134 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 RN7SKP32-201ENST00000410167 303 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 Z92545.1-201ENST00000411782 234 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AC003685.2-201ENST00000422795 395 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.63□□□□□ -2.15
CCDC58Q4VC31 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC58Q4VC31 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AL121769.1-201ENST00000469473 401 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AC140059.1-201ENST00000489238 361 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC58Q4VC31 RNU5F-8P-201ENST00000515941 111 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AC010186.2-204ENST00000537668 439 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 SETP7-201ENST00000552169 453 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC58Q4VC31 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AL160281.1-201ENST00000605307 311 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AL354950.1-201ENST00000614150 568 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AC007998.5-201ENST00000622938 237 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 AC040168.1-201ENST00000623594 991 ntBASIC1.63□□□□□ -2.15
CCDC58Q4VC31 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 SNORA51.12-201ENST00000384448 134 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 RNU2-2P-201ENST00000410396 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC093106.2-201ENST00000428212 385 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC147055.4-201ENST00000504399 745 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 RNU6-488P-201ENST00000515918 99 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 RNU6-970P-201ENST00000516312 107 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC022616.2-201ENST00000523185 300 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC025857.1-201ENST00000525252 377 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 MIR4419B-201ENST00000577260 68 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 MIR3618-201ENST00000580330 88 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC243960.4-201ENST00000600532 288 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC055876.5-201ENST00000605667 259 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC007038.2-201ENST00000608095 740 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.15-201ENST00000611544 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.16-201ENST00000613119 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.12-201ENST00000613778 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.20-201ENST00000613956 192 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.9-201ENST00000615427 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.11-201ENST00000616345 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.2-201ENST00000616535 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.3-201ENST00000617785 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.19-201ENST00000618602 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 RNU2-1-201ENST00000618664 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.6-201ENST00000619225 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.5-201ENST00000619465 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 U2.10-201ENST00000620268 191 ntBASIC1.62□□□□□ -2.15
CCDC58Q4VC31 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC58Q4VC31 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC58Q4VC31 MTCO1P4-201ENST00000520516 1409 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 MIR483-201ENST00000385070 76 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 PTGES3P2-201ENST00000407942 482 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 RNU2-20P-201ENST00000410425 191 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 AL109913.1-201ENST00000421173 514 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC58Q4VC31 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC58Q4VC31 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CCDC58Q4VC31 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC58Q4VC31 AC096638.1-201ENST00000444678 216 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 RPL9P6-201ENST00000492764 598 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 SUMO2P6-201ENST00000505273 288 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 RNU6-202P-201ENST00000515998 96 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC58Q4VC31 LINC00933-203ENST00000559812 219 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC58Q4VC31 AC079791.1-201ENST00000605356 973 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
CCDC58Q4VC31 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC58Q4VC31 OR5H6-203ENST00000642105 978 ntBASIC1.61□□□□□ -2.15
CCDC58Q4VC31 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 SNORA23-201ENST00000365128 182 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 SNORA67.3-201ENST00000384366 140 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC019129.1-201ENST00000403786 261 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC099548.1-201ENST00000421443 426 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC58Q4VC31 DNAJC19P4-201ENST00000440115 345 ntBASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC58Q4VC31 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.6□□□□□ -2.15
CCDC58Q4VC31 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC58Q4VC31 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms