Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDL3P58872 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDL3P58872 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDL3P58872 RNU4-21P-201ENST00000362802 126 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 SNORA14A-201ENST00000364773 135 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 RNU6-283P-201ENST00000364788 107 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDL3P58872 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDL3P58872 NPM1P11-201ENST00000417106 855 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.13□□□□□ -1.75
RHBDL3P58872 HMGB1P27-201ENST00000431429 603 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDL3P58872 AC098826.1-201ENST00000433943 471 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AC119618.1-201ENST00000434191 222 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AC129850.1-201ENST00000436203 508 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDL3P58872 GAPDHP27-201ENST00000447427 1020 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.13□□□□□ -1.75
RHBDL3P58872 DNAJC19P1-201ENST00000455312 319 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 RNA5SP269-201ENST00000459032 137 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AC087588.1-201ENST00000462203 316 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 MTCO2P29-201ENST00000465212 189 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 RN7SL807P-201ENST00000470923 297 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.13□□□□□ -1.75
RHBDL3P58872 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDL3P58872 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
RHBDL3P58872 RNU2-10P-201ENST00000516375 211 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AP003467.2-201ENST00000520175 319 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.13□□□□□ -1.75
RHBDL3P58872 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
RHBDL3P58872 AC128657.1-201ENST00000549459 145 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AC011611.1-201ENST00000552179 197 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDL3P58872 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDL3P58872 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDL3P58872 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.13□□□□□ -1.75
RHBDL3P58872 MIR3682-201ENST00000581338 84 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDL3P58872 Z94722.1-201ENST00000604328 474 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 HMGB1P50-201ENST00000605814 607 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDL3P58872 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.13□□□□□ -1.75
RHBDL3P58872 SNORA50A-202ENST00000629536 136 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.13□□□□□ -1.75
RHBDL3P58872 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDL3P58872 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDL3P58872 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDL3P58872 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RHBDL3P58872 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RHBDL3P58872 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHBDL3P58872 AL021407.1-201ENST00000404531 386 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.12□□□□□ -1.75
RHBDL3P58872 AC012498.1-201ENST00000424037 437 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.12□□□□□ -1.75
RHBDL3P58872 RPL23AP82-202ENST00000427528 469 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AC007919.1-201ENST00000429380 217 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.12□□□□□ -1.75
RHBDL3P58872 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.12□□□□□ -1.75
RHBDL3P58872 PIGFP3-201ENST00000441918 722 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AC009961.3-201ENST00000449832 765 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AC140076.1-201ENST00000449897 361 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.12□□□□□ -1.75
RHBDL3P58872 snoU109.1-201ENST00000459339 135 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.12□□□□□ -1.75
RHBDL3P58872 AC114797.1-201ENST00000514003 728 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 RN7SKP83-201ENST00000516512 178 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.12□□□□□ -1.75
RHBDL3P58872 AC087373.1-201ENST00000524920 491 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.12□□□□□ -1.75
RHBDL3P58872 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.12□□□□□ -1.75
RHBDL3P58872 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.12□□□□□ -1.75
RHBDL3P58872 AC108747.1-201ENST00000609508 535 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.12□□□□□ -1.75
RHBDL3P58872 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AC073308.1-201ENST00000623696 305 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 AC091953.2-201ENST00000623979 160 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 MTND1P37-201ENST00000636562 264 ntBASIC4.12□□□□□ -1.75
RHBDL3P58872 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.12□□□□□ -1.75
RHBDL3P58872 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RHBDL3P58872 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHBDL3P58872 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.11□□□□□ -1.75
RHBDL3P58872 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDL3P58872 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.11□□□□□ -1.75
RHBDL3P58872 OR1S2-201ENST00000302592 978 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDL3P58872 U3.11-201ENST00000364476 212 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 RNY3P10-201ENST00000384764 102 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 MIR325-201ENST00000385260 98 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 AL354719.1-201ENST00000406535 843 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 ZNF90P2-204ENST00000419323 1075 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.11□□□□□ -1.75
RHBDL3P58872 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDL3P58872 AC092047.1-201ENST00000424997 240 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDL3P58872 AF228730.2-201ENST00000438784 848 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 BNIP3P2-201ENST00000441221 577 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.11□□□□□ -1.75
RHBDL3P58872 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.11□□□□□ -1.75
RHBDL3P58872 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms