Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH11P55287 AC125611.2-201ENST00000551907 647 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.18□□□□□ -1.9
CDH11P55287 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH11P55287 ZNF192P1-203ENST00000565888 810 ntBASIC3.18□□□□□ -1.9
CDH11P55287 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH11P55287 EIF1P4-201ENST00000572664 335 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC137800.2-201ENST00000574375 120 ntBASIC3.18□□□□□ -1.9
CDH11P55287 ZNF415P1-201ENST00000582279 1166 ntBASIC3.18□□□□□ -1.9
CDH11P55287 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH11P55287 KC877982.1-201ENST00000602313 470 ntBASIC3.18□□□□□ -1.9
CDH11P55287 SRGNP1-201ENST00000603392 451 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC010591.1-201ENST00000603941 649 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AL161729.4-201ENST00000604650 476 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC121334.2-201ENST00000605387 271 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AL139286.2-201ENST00000606838 396 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC013562.2-201ENST00000611632 603 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC004696.1-201ENST00000614345 607 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC091834.1-201ENST00000614543 472 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH11P55287 AC015540.1-201ENST00000615828 501 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AP003355.3-201ENST00000623465 114 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC095031.1-201ENST00000623685 672 ntBASIC3.18□□□□□ -1.9
CDH11P55287 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH11P55287 MTND5P29-201ENST00000458676 1807 ntBASIC3.18□□□□□ -1.9
CDH11P55287 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CDH11P55287 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH11P55287 MTCO1P9-201ENST00000505577 1534 ntBASIC3.18□□□□□ -1.9
CDH11P55287 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH11P55287 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH11P55287 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH11P55287 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
CDH11P55287 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH11P55287 AL513302.2-201ENST00000562313 1842 ntBASIC3.17□□□□□ -1.9
CDH11P55287 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH11P55287 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
CDH11P55287 MIR208A-201ENST00000362287 71 ntBASIC3.17□□□□□ -1.9
CDH11P55287 RNU5E-1-201ENST00000362477 120 ntBASIC3.17□□□□□ -1.9
CDH11P55287 RNY4P16-201ENST00000364768 94 ntBASIC3.17□□□□□ -1.9
CDH11P55287 RNY4P34-201ENST00000364779 95 ntBASIC3.17□□□□□ -1.9
CDH11P55287 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CDH11P55287 Y_RNA.517-201ENST00000384551 106 ntBASIC3.17□□□□□ -1.9
CDH11P55287 MIR607-201ENST00000385241 96 ntBASIC3.17□□□□□ -1.9
CDH11P55287 Y_RNA.582-201ENST00000391023 95 ntBASIC3.17□□□□□ -1.9
CDH11P55287 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH11P55287 RPL23AP32-201ENST00000395315 459 ntBASIC3.17□□□□□ -1.9
CDH11P55287 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CDH11P55287 SNORA11.1-201ENST00000408133 129 ntBASIC3.17□□□□□ -1.9
CDH11P55287 RNA5SP31-201ENST00000411144 127 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH11P55287 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH11P55287 MTND3P17-201ENST00000416968 344 ntBASIC3.17□□□□□ -1.9
CDH11P55287 C1DP2-201ENST00000418167 426 ntBASIC3.17□□□□□ -1.9
CDH11P55287 ZNF885P-201ENST00000420174 1098 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC245054.1-201ENST00000420944 258 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH11P55287 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH11P55287 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH11P55287 RPL35AP22-201ENST00000436855 335 ntBASIC3.17□□□□□ -1.9
CDH11P55287 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH11P55287 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH11P55287 RNU7-59P-201ENST00000459101 61 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC138853.1-201ENST00000503549 823 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH11P55287 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH11P55287 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH11P55287 RNU2-58P-201ENST00000516403 183 ntBASIC3.17□□□□□ -1.9
CDH11P55287 MTCO2P4-201ENST00000517968 247 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH11P55287 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH11P55287 CCNG2P1-201ENST00000549521 1000 ntBASIC3.17□□□□□ -1.9
CDH11P55287 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH11P55287 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH11P55287 MIR4293-201ENST00000584305 78 ntBASIC3.17□□□□□ -1.9
CDH11P55287 DUXAP4-201ENST00000603046 613 ntBASIC3.17□□□□□ -1.9
CDH11P55287 RNU1-30P-201ENST00000606575 163 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC004908.2-201ENST00000609090 574 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC103710.1-201ENST00000610003 901 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC005332.10-201ENST00000612725 619 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC008498.1-201ENST00000613012 531 ntBASIC3.17□□□□□ -1.9
CDH11P55287 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC099842.1-201ENST00000619919 596 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AL359740.1-201ENST00000624340 592 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AC019226.1-201ENST00000625666 515 ntBASIC3.17□□□□□ -1.9
CDH11P55287 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH11P55287 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
CDH11P55287 AL392088.2-201ENST00000637607 285 ntBASIC3.17□□□□□ -1.9
CDH11P55287 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH11P55287 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH11P55287 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH11P55287 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH11P55287 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.16□□□□□ -1.9
CDH11P55287 RNA5SP72-201ENST00000364442 117 ntBASIC3.16□□□□□ -1.9
CDH11P55287 Y_RNA.333-201ENST00000365274 102 ntBASIC3.16□□□□□ -1.9
CDH11P55287 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CDH11P55287 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH11P55287 RNU6-195P-201ENST00000411352 109 ntBASIC3.16□□□□□ -1.9
CDH11P55287 HMGN1P24-201ENST00000412282 298 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH11P55287 RPL23AP82-202ENST00000427528 469 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms