Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCPP55072 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VCPP55072 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCPP55072 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VCPP55072 RNU6-157P-201ENST00000383957 107 ntBASIC3.08□□□□□ -1.92
VCPP55072 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCPP55072 RNU6-757P-201ENST00000410334 100 ntBASIC3.08□□□□□ -1.92
VCPP55072 USP9YP33-201ENST00000412220 421 ntBASIC3.08□□□□□ -1.92
VCPP55072 AL008987.1-201ENST00000415528 237 ntBASIC3.08□□□□□ -1.92
VCPP55072 RPS24P7-201ENST00000416921 246 ntBASIC3.08□□□□□ -1.92
VCPP55072 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.08□□□□□ -1.92
VCPP55072 MTCO2P5-201ENST00000422621 426 ntBASIC3.08□□□□□ -1.92
VCPP55072 AL953862.1-201ENST00000423016 168 ntBASIC3.08□□□□□ -1.92
VCPP55072 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.08□□□□□ -1.92
VCPP55072 USP9YP35-201ENST00000435696 412 ntBASIC3.08□□□□□ -1.92
VCPP55072 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.08□□□□□ -1.92
VCPP55072 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.08□□□□□ -1.92
VCPP55072 ARPC3P5-201ENST00000448802 534 ntBASIC3.08□□□□□ -1.92
VCPP55072 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.08□□□□□ -1.92
VCPP55072 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VCPP55072 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VCPP55072 AC023424.2-201ENST00000493479 777 ntBASIC3.08□□□□□ -1.92
VCPP55072 AC034244.1-201ENST00000507687 207 ntBASIC3.08□□□□□ -1.92
VCPP55072 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.08□□□□□ -1.92
VCPP55072 SNORA70.16-201ENST00000516390 95 ntBASIC3.08□□□□□ -1.92
VCPP55072 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VCPP55072 AP000873.5-201ENST00000533906 236 ntBASIC3.08□□□□□ -1.92
VCPP55072 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.08□□□□□ -1.92
VCPP55072 SETP7-201ENST00000552169 453 ntBASIC3.08□□□□□ -1.92
VCPP55072 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.08□□□□□ -1.92
VCPP55072 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.08□□□□□ -1.92
VCPP55072 AC083760.1-201ENST00000589621 670 ntBASIC3.08□□□□□ -1.92
VCPP55072 VN1R82P-201ENST00000601481 356 ntBASIC3.08□□□□□ -1.92
VCPP55072 HSPE1P7-201ENST00000604681 321 ntBASIC3.08□□□□□ -1.92
VCPP55072 AC025588.2-201ENST00000604851 466 ntBASIC3.08□□□□□ -1.92
VCPP55072 AL592221.1-201ENST00000605266 382 ntBASIC3.08□□□□□ -1.92
VCPP55072 AC011330.2-201ENST00000621680 635 ntBASIC3.08□□□□□ -1.92
VCPP55072 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
VCPP55072 OR4G11P-202ENST00000642116 1414 ntBASIC3.08□□□□□ -1.92
VCPP55072 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCPP55072 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCPP55072 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
VCPP55072 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
VCPP55072 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
VCPP55072 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
VCPP55072 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.07□□□□□ -1.92
VCPP55072 Y_RNA.238-201ENST00000364441 102 ntBASIC3.07□□□□□ -1.92
VCPP55072 RNU6-952P-201ENST00000391164 108 ntBASIC3.07□□□□□ -1.92
VCPP55072 AL451074.5-201ENST00000415894 435 ntBASIC3.07□□□□□ -1.92
VCPP55072 MTCYBP38-201ENST00000417160 1123 ntBASIC3.07□□□□□ -1.92
VCPP55072 RPL7P30-201ENST00000420888 709 ntBASIC3.07□□□□□ -1.92
VCPP55072 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.07□□□□□ -1.92
VCPP55072 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.07□□□□□ -1.92
VCPP55072 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.07□□□□□ -1.92
VCPP55072 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.07□□□□□ -1.92
VCPP55072 AC087499.2-201ENST00000432861 149 ntBASIC3.07□□□□□ -1.92
VCPP55072 YWHAZP7-201ENST00000436906 631 ntBASIC3.07□□□□□ -1.92
VCPP55072 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.07□□□□□ -1.92
VCPP55072 MUPP-201ENST00000438111 566 ntBASIC3.07□□□□□ -1.92
VCPP55072 AL513328.1-201ENST00000446460 224 ntBASIC3.07□□□□□ -1.92
VCPP55072 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.07□□□□□ -1.92
VCPP55072 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VCPP55072 AC034159.1-201ENST00000513885 583 ntBASIC3.07□□□□□ -1.92
VCPP55072 RNU6-150P-201ENST00000516237 95 ntBASIC3.07□□□□□ -1.92
VCPP55072 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VCPP55072 ATP5F1P5-201ENST00000526403 760 ntBASIC3.07□□□□□ -1.92
VCPP55072 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.07□□□□□ -1.92
VCPP55072 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
VCPP55072 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.07□□□□□ -1.92
VCPP55072 DUXAP1-201ENST00000556632 463 ntBASIC3.07□□□□□ -1.92
VCPP55072 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.07□□□□□ -1.92
VCPP55072 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.07□□□□□ -1.92
VCPP55072 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.07□□□□□ -1.92
VCPP55072 AL022578.1-201ENST00000439330 1433 ntBASIC3.07□□□□□ -1.92
VCPP55072 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.07□□□□□ -1.92
VCPP55072 GABRG2-229ENST00000641017 3628 ntBASIC3.07□□□□□ -1.92
VCPP55072 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VCPP55072 RNU6-1155P-201ENST00000363554 107 ntBASIC3.06□□□□□ -1.92
VCPP55072 RPL21P75-201ENST00000396599 483 ntBASIC3.06□□□□□ -1.92
VCPP55072 RPL21P28-201ENST00000401418 483 ntBASIC3.06□□□□□ -1.92
VCPP55072 AL592114.1-201ENST00000403842 483 ntBASIC3.06□□□□□ -1.92
VCPP55072 RNA5SP247-201ENST00000411181 105 ntBASIC3.06□□□□□ -1.92
VCPP55072 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.06□□□□□ -1.92
VCPP55072 AL592148.1-201ENST00000413568 445 ntBASIC3.06□□□□□ -1.92
VCPP55072 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.06□□□□□ -1.92
VCPP55072 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.06□□□□□ -1.92
VCPP55072 MTND1P32-201ENST00000433043 938 ntBASIC3.06□□□□□ -1.92
VCPP55072 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.06□□□□□ -1.92
VCPP55072 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
VCPP55072 RPL21P2-201ENST00000440049 481 ntBASIC3.06□□□□□ -1.92
VCPP55072 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.06□□□□□ -1.92
VCPP55072 SNRPGP6-201ENST00000451124 220 ntBASIC3.06□□□□□ -1.92
VCPP55072 AL353691.1-201ENST00000451332 387 ntBASIC3.06□□□□□ -1.92
VCPP55072 Z82190.1-201ENST00000454534 490 ntBASIC3.06□□□□□ -1.92
VCPP55072 snoU13.15-201ENST00000459407 104 ntBASIC3.06□□□□□ -1.92
VCPP55072 RPL21P39-201ENST00000463605 483 ntBASIC3.06□□□□□ -1.92
VCPP55072 RPL21P93-201ENST00000480465 489 ntBASIC3.06□□□□□ -1.92
VCPP55072 AC233702.1-201ENST00000482905 502 ntBASIC3.06□□□□□ -1.92
VCPP55072 AC087190.1-201ENST00000484462 480 ntBASIC3.06□□□□□ -1.92
VCPP55072 AC093591.1-201ENST00000491435 481 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms