Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC091304.9-201ENST00000612091 226 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 AC091953.2-201ENST00000623979 160 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NR1H2P55055 AC007785.2-201ENST00000598627 1916 ntBASIC3.64□□□□□ -1.83
NR1H2P55055 FARSBP1-201ENST00000435808 1778 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H2P55055 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H2P55055 SNORA60-201ENST00000362396 134 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 SNORD35B-201ENST00000363660 87 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 SNORA70.4-201ENST00000365509 134 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 RNU1-39P-201ENST00000383897 165 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 SOD2P1-201ENST00000396543 562 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.63□□□□□ -1.83
NR1H2P55055 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H2P55055 USP9YP36-201ENST00000424581 829 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 ISCA1P6-201ENST00000427740 390 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H2P55055 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H2P55055 AC009961.2-201ENST00000435771 251 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H2P55055 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H2P55055 AC020550.1-201ENST00000447385 163 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H2P55055 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.63□□□□□ -1.83
NR1H2P55055 AC013267.1-201ENST00000458227 267 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H2P55055 AC011825.1-201ENST00000484967 388 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 TRBV12-2-201ENST00000489763 344 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 RPL29P14-201ENST00000495837 428 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AC138853.1-201ENST00000503549 823 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H2P55055 SNORA31.1-201ENST00000515993 133 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 SNORA31.5-201ENST00000516190 133 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 SUMO2P20-201ENST00000520803 283 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H2P55055 AC128657.1-201ENST00000549459 145 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H2P55055 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H2P55055 AC090877.1-201ENST00000561418 344 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H2P55055 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.63□□□□□ -1.83
NR1H2P55055 MIR3609-201ENST00000582661 80 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AC053481.4-201ENST00000583164 216 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.63□□□□□ -1.83
NR1H2P55055 AL670379.6-201ENST00000603753 252 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AL670379.11-201ENST00000604059 253 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AC013553.2-201ENST00000604244 589 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AC008162.1-201ENST00000604718 254 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AL670379.1-201ENST00000604752 252 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AL670379.5-201ENST00000605253 252 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AL670379.12-201ENST00000605291 253 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AL670379.8-201ENST00000605353 252 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 AL670379.7-201ENST00000605823 252 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H2P55055 AC091834.1-201ENST00000614543 472 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 PISRT1-201ENST00000626175 531 ntBASIC3.63□□□□□ -1.83
NR1H2P55055 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H2P55055 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H2P55055 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H2P55055 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H2P55055 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NR1H2P55055 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.63□□□□□ -1.83
NR1H2P55055 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NR1H2P55055 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NR1H2P55055 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
NR1H2P55055 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NR1H2P55055 AL137003.2-201ENST00000606924 2538 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NR1H2P55055 U3.11-201ENST00000364476 212 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 RNY4P16-201ENST00000364768 94 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NR1H2P55055 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
NR1H2P55055 PTMAP2-201ENST00000397627 327 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 MTCO1P21-201ENST00000416634 589 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 BX295541.1-201ENST00000417774 250 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 AC104651.1-201ENST00000427559 735 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 AC010975.2-201ENST00000427781 588 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 AC092573.2-201ENST00000434546 243 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 MRPS31P2-201ENST00000451581 518 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.62□□□□□ -1.83
NR1H2P55055 RPL37P6-201ENST00000460682 294 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 AC010460.1-201ENST00000507087 466 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NR1H2P55055 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 RNU6-927P-201ENST00000516199 100 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 DUXAP2-201ENST00000519198 589 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 MTCYBP20-201ENST00000524239 1129 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 AC245505.1-201ENST00000556398 224 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 AC009063.1-201ENST00000563342 702 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms