Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
COPB1P53618 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.95□□□□□ -1.78
COPB1P53618 AP003117.2-201ENST00000606010 545 ntBASIC3.95□□□□□ -1.78
COPB1P53618 AL020991.1-201ENST00000612314 373 ntBASIC3.95□□□□□ -1.78
COPB1P53618 AC005344.1-201ENST00000613391 459 ntBASIC3.95□□□□□ -1.78
COPB1P53618 AL713922.2-201ENST00000619384 716 ntBASIC3.95□□□□□ -1.78
COPB1P53618 AC022149.2-201ENST00000621061 203 ntBASIC3.95□□□□□ -1.78
COPB1P53618 AC112204.3-201ENST00000623822 332 ntBASIC3.95□□□□□ -1.78
COPB1P53618 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.95□□□□□ -1.78
COPB1P53618 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.95□□□□□ -1.78
COPB1P53618 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.95□□□□□ -1.78
COPB1P53618 AL139811.1-201ENST00000424779 2299 ntBASIC3.95□□□□□ -1.78
COPB1P53618 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COPB1P53618 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COPB1P53618 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
COPB1P53618 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COPB1P53618 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COPB1P53618 RNU6-108P-201ENST00000365558 107 ntBASIC3.94□□□□□ -1.78
COPB1P53618 SNORA70E-201ENST00000384492 135 ntBASIC3.94□□□□□ -1.78
COPB1P53618 RPS15AP12-201ENST00000419498 388 ntBASIC3.94□□□□□ -1.78
COPB1P53618 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.94□□□□□ -1.78
COPB1P53618 AC245054.1-201ENST00000420944 258 ntBASIC3.94□□□□□ -1.78
COPB1P53618 PSMA2P3-201ENST00000429685 675 ntBASIC3.94□□□□□ -1.78
COPB1P53618 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.94□□□□□ -1.78
COPB1P53618 RPS15AP9-201ENST00000439856 381 ntBASIC3.94□□□□□ -1.78
COPB1P53618 RAC1P7-201ENST00000445367 377 ntBASIC3.94□□□□□ -1.78
COPB1P53618 FDX1P2-201ENST00000450769 375 ntBASIC3.94□□□□□ -1.78
COPB1P53618 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.94□□□□□ -1.78
COPB1P53618 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.94□□□□□ -1.78
COPB1P53618 RPL36AP51-201ENST00000487216 318 ntBASIC3.94□□□□□ -1.78
COPB1P53618 AC079382.1-201ENST00000493346 557 ntBASIC3.94□□□□□ -1.78
COPB1P53618 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.94□□□□□ -1.78
COPB1P53618 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.94□□□□□ -1.78
COPB1P53618 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.94□□□□□ -1.78
COPB1P53618 AL359212.1-201ENST00000556608 614 ntBASIC3.94□□□□□ -1.78
COPB1P53618 AC091135.1-201ENST00000585943 307 ntBASIC3.94□□□□□ -1.78
COPB1P53618 AC025449.1-201ENST00000603896 529 ntBASIC3.94□□□□□ -1.78
COPB1P53618 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.94□□□□□ -1.78
COPB1P53618 AC093788.1-201ENST00000609356 927 ntBASIC3.94□□□□□ -1.78
COPB1P53618 AC245517.5-201ENST00000611529 162 ntBASIC3.94□□□□□ -1.78
COPB1P53618 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.94□□□□□ -1.78
COPB1P53618 AL357559.1-201ENST00000622228 274 ntBASIC3.94□□□□□ -1.78
COPB1P53618 AC005609.4-201ENST00000625071 447 ntBASIC3.94□□□□□ -1.78
COPB1P53618 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.94□□□□□ -1.78
COPB1P53618 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.94□□□□□ -1.78
COPB1P53618 AC090229.1-201ENST00000590983 1609 ntBASIC3.94□□□□□ -1.78
COPB1P53618 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COPB1P53618 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.93□□□□□ -1.78
COPB1P53618 Y_RNA.38-201ENST00000362617 102 ntBASIC3.93□□□□□ -1.78
COPB1P53618 RNU5A-8P-201ENST00000364102 114 ntBASIC3.93□□□□□ -1.78
COPB1P53618 RNU6-1322P-201ENST00000364309 107 ntBASIC3.93□□□□□ -1.78
COPB1P53618 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
COPB1P53618 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.93□□□□□ -1.78
COPB1P53618 RNU6-456P-201ENST00000384493 107 ntBASIC3.93□□□□□ -1.78
COPB1P53618 MT-TL1-201ENST00000386347 75 ntBASIC3.93□□□□□ -1.78
COPB1P53618 AC068050.1-201ENST00000394891 380 ntBASIC3.93□□□□□ -1.78
COPB1P53618 AL590704.1-201ENST00000402856 794 ntBASIC3.93□□□□□ -1.78
COPB1P53618 RN7SKP285-201ENST00000410137 318 ntBASIC3.93□□□□□ -1.78
COPB1P53618 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.93□□□□□ -1.78
COPB1P53618 MRPS18BP2-201ENST00000434310 759 ntBASIC3.93□□□□□ -1.78
COPB1P53618 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.93□□□□□ -1.78
COPB1P53618 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.93□□□□□ -1.78
COPB1P53618 MTND3P10-201ENST00000450967 341 ntBASIC3.93□□□□□ -1.78
COPB1P53618 MTND1P9-201ENST00000453775 944 ntBASIC3.93□□□□□ -1.78
COPB1P53618 AL133162.1-201ENST00000463228 453 ntBASIC3.93□□□□□ -1.78
COPB1P53618 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.93□□□□□ -1.78
COPB1P53618 MTCYBP18-201ENST00000501056 747 ntBASIC3.93□□□□□ -1.78
COPB1P53618 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.93□□□□□ -1.78
COPB1P53618 RNU6-1281P-201ENST00000516223 105 ntBASIC3.93□□□□□ -1.78
COPB1P53618 RN7SKP60-201ENST00000516985 239 ntBASIC3.93□□□□□ -1.78
COPB1P53618 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.93□□□□□ -1.78
COPB1P53618 AC007991.1-201ENST00000522680 631 ntBASIC3.93□□□□□ -1.78
COPB1P53618 AC026333.2-201ENST00000542164 106 ntBASIC3.93□□□□□ -1.78
COPB1P53618 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.93□□□□□ -1.78
COPB1P53618 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.93□□□□□ -1.78
COPB1P53618 TGIF1P1-201ENST00000558095 802 ntBASIC3.93□□□□□ -1.78
COPB1P53618 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.93□□□□□ -1.78
COPB1P53618 AC090616.5-202ENST00000582111 297 ntBASIC3.93□□□□□ -1.78
COPB1P53618 MIR5187-201ENST00000583479 76 ntBASIC3.93□□□□□ -1.78
COPB1P53618 AC011451.2-201ENST00000604303 598 ntBASIC3.93□□□□□ -1.78
COPB1P53618 AC007621.1-201ENST00000604544 437 ntBASIC3.93□□□□□ -1.78
COPB1P53618 LARP7P1-201ENST00000605576 316 ntBASIC3.93□□□□□ -1.78
COPB1P53618 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.93□□□□□ -1.78
COPB1P53618 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.93□□□□□ -1.78
COPB1P53618 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.93□□□□□ -1.78
COPB1P53618 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
COPB1P53618 EXOC5P1-201ENST00000510543 1969 ntBASIC3.93□□□□□ -1.78
COPB1P53618 NMD3P1-201ENST00000439704 1488 ntBASIC3.92□□□□□ -1.78
COPB1P53618 AP004289.2-201ENST00000444413 1457 ntBASIC3.92□□□□□ -1.78
COPB1P53618 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COPB1P53618 CASC19-280ENST00000642102 1351 ntBASIC3.92□□□□□ -1.78
COPB1P53618 RNU6-1120P-201ENST00000362988 108 ntBASIC3.92□□□□□ -1.78
COPB1P53618 RNU6-1097P-201ENST00000363586 107 ntBASIC3.92□□□□□ -1.78
COPB1P53618 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.92□□□□□ -1.78
COPB1P53618 Y_RNA.493-201ENST00000384422 102 ntBASIC3.92□□□□□ -1.78
COPB1P53618 RNU6-821P-201ENST00000390995 107 ntBASIC3.92□□□□□ -1.78
COPB1P53618 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.92□□□□□ -1.78
COPB1P53618 RPS3AP24-201ENST00000407896 734 ntBASIC3.92□□□□□ -1.78
COPB1P53618 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.92□□□□□ -1.78
COPB1P53618 AC009237.5-201ENST00000414271 501 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms