Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RPL23AP29-201ENST00000397284 453 ntBASIC2.59□□□□□ -1.99
RORAP35398 VN1R51P-201ENST00000411675 945 ntBASIC2.59□□□□□ -1.99
RORAP35398 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.59□□□□□ -1.99
RORAP35398 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.59□□□□□ -1.99
RORAP35398 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.59□□□□□ -1.99
RORAP35398 AP000936.2-201ENST00000447151 681 ntBASIC2.59□□□□□ -1.99
RORAP35398 EXOSC3P1-201ENST00000448649 500 ntBASIC2.59□□□□□ -1.99
RORAP35398 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.59□□□□□ -1.99
RORAP35398 RPL9P33-201ENST00000484311 566 ntBASIC2.59□□□□□ -1.99
RORAP35398 RPS27P26-201ENST00000494583 239 ntBASIC2.59□□□□□ -1.99
RORAP35398 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.59□□□□□ -1.99
RORAP35398 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.59□□□□□ -1.99
RORAP35398 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.59□□□□□ -1.99
RORAP35398 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
RORAP35398 RNA5SP471-201ENST00000516971 106 ntBASIC2.59□□□□□ -1.99
RORAP35398 SNORA31.22-201ENST00000517204 135 ntBASIC2.59□□□□□ -1.99
RORAP35398 AC021451.1-201ENST00000523498 1129 ntBASIC2.59□□□□□ -1.99
RORAP35398 CASP1P1-201ENST00000526345 212 ntBASIC2.59□□□□□ -1.99
RORAP35398 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.59□□□□□ -1.99
RORAP35398 AC027807.1-201ENST00000559921 996 ntBASIC2.59□□□□□ -1.99
RORAP35398 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.59□□□□□ -1.99
RORAP35398 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.59□□□□□ -1.99
RORAP35398 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.59□□□□□ -1.99
RORAP35398 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -1.99
RORAP35398 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.59□□□□□ -1.99
RORAP35398 AC008277.2-201ENST00000605196 797 ntBASIC2.59□□□□□ -1.99
RORAP35398 AC245517.5-201ENST00000611529 162 ntBASIC2.59□□□□□ -1.99
RORAP35398 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.59□□□□□ -1.99
RORAP35398 AL445264.1-201ENST00000621719 171 ntBASIC2.59□□□□□ -1.99
RORAP35398 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RORAP35398 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.58□□□□□ -2
RORAP35398 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RORAP35398 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
RORAP35398 RNU6-28P-201ENST00000362378 107 ntBASIC2.58□□□□□ -2
RORAP35398 RNU6-621P-201ENST00000364752 109 ntBASIC2.58□□□□□ -2
RORAP35398 MIR181A2-201ENST00000384863 110 ntBASIC2.58□□□□□ -2
RORAP35398 AL590004.2-201ENST00000404787 371 ntBASIC2.58□□□□□ -2
RORAP35398 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.58□□□□□ -2
RORAP35398 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.58□□□□□ -2
RORAP35398 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.58□□□□□ -2
RORAP35398 RPS3AP37-201ENST00000419176 745 ntBASIC2.58□□□□□ -2
RORAP35398 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.58□□□□□ -2
RORAP35398 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.58□□□□□ -2
RORAP35398 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.58□□□□□ -2
RORAP35398 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.58□□□□□ -2
RORAP35398 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.58□□□□□ -2
RORAP35398 BX322784.1-201ENST00000455793 1077 ntBASIC2.58□□□□□ -2
RORAP35398 AC003982.1-202ENST00000469928 248 ntBASIC2.58□□□□□ -2
RORAP35398 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.58□□□□□ -2
RORAP35398 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.58□□□□□ -2
RORAP35398 RNU4-29P-201ENST00000515943 174 ntBASIC2.58□□□□□ -2
RORAP35398 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
RORAP35398 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.58□□□□□ -2
RORAP35398 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.58□□□□□ -2
RORAP35398 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.58□□□□□ -2
RORAP35398 AC023813.2-201ENST00000564321 469 ntBASIC2.58□□□□□ -2
RORAP35398 ACTR3BP3-201ENST00000565577 979 ntBASIC2.58□□□□□ -2
RORAP35398 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.58□□□□□ -2
RORAP35398 BNIP3P26-201ENST00000600827 554 ntBASIC2.58□□□□□ -2
RORAP35398 AC021749.1-201ENST00000604322 607 ntBASIC2.58□□□□□ -2
RORAP35398 AC024560.3-201ENST00000608482 349 ntBASIC2.58□□□□□ -2
RORAP35398 AL450472.3-201ENST00000615578 367 ntBASIC2.58□□□□□ -2
RORAP35398 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.58□□□□□ -2
RORAP35398 AC073308.1-201ENST00000623696 305 ntBASIC2.58□□□□□ -2
RORAP35398 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.58□□□□□ -2
RORAP35398 AC079597.1-201ENST00000624306 508 ntBASIC2.58□□□□□ -2
RORAP35398 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.58□□□□□ -2
RORAP35398 AC010680.1-201ENST00000590024 3590 ntBASIC2.58□□□□□ -2
RORAP35398 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.58□□□□□ -2
RORAP35398 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RORAP35398 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RORAP35398 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.57□□□□□ -2
RORAP35398 AL079343.1-201ENST00000572358 1771 ntBASIC2.57□□□□□ -2
RORAP35398 Y_RNA.234-201ENST00000364409 97 ntBASIC2.57□□□□□ -2
RORAP35398 RNU6-413P-201ENST00000384115 107 ntBASIC2.57□□□□□ -2
RORAP35398 MIR620-201ENST00000385232 95 ntBASIC2.57□□□□□ -2
RORAP35398 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.57□□□□□ -2
RORAP35398 AL512633.1-201ENST00000399931 655 ntBASIC2.57□□□□□ -2
RORAP35398 AL136310.1-201ENST00000404926 654 ntBASIC2.57□□□□□ -2
RORAP35398 MTATP6P20-201ENST00000414147 562 ntBASIC2.57□□□□□ -2
RORAP35398 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.57□□□□□ -2
RORAP35398 SUMO1P4-201ENST00000429430 302 ntBASIC2.57□□□□□ -2
RORAP35398 ARL5AP4-201ENST00000430731 512 ntBASIC2.57□□□□□ -2
RORAP35398 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
RORAP35398 AC112220.1-201ENST00000434628 355 ntBASIC2.57□□□□□ -2
RORAP35398 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.57□□□□□ -2
RORAP35398 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.57□□□□□ -2
RORAP35398 MTCO2P25-201ENST00000447065 681 ntBASIC2.57□□□□□ -2
RORAP35398 ARPC3P5-201ENST00000448802 534 ntBASIC2.57□□□□□ -2
RORAP35398 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.57□□□□□ -2
RORAP35398 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.57□□□□□ -2
RORAP35398 AC027673.1-201ENST00000456245 405 ntBASIC2.57□□□□□ -2
RORAP35398 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.57□□□□□ -2
RORAP35398 AC097493.1-201ENST00000463958 372 ntBASIC2.57□□□□□ -2
RORAP35398 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.57□□□□□ -2
RORAP35398 AC090525.1-201ENST00000479116 478 ntBASIC2.57□□□□□ -2
RORAP35398 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.57□□□□□ -2
RORAP35398 AC147055.4-201ENST00000504399 745 ntBASIC2.57□□□□□ -2
RORAP35398 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.57□□□□□ -2
RORAP35398 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms