Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC090079.2-201ENST00000575289 768 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 AC124016.2-201ENST00000610058 665 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 AP006248.3-201ENST00000623580 594 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 AP003122.6-201ENST00000623831 495 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 AC097372.4-201ENST00000625025 466 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.93□□□□□ -2.1
COL11A1P12107 MTCO1P6-201ENST00000481192 1384 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 MIR16-2-201ENST00000362117 81 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 RNU6-799P-201ENST00000363567 107 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 RNU6-452P-201ENST00000384406 107 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 RNU6-1005P-201ENST00000384519 107 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
COL11A1P12107 MCTS2P-201ENST00000394552 546 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 UBE2V1P9-201ENST00000414760 368 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 VN1R42P-201ENST00000424651 344 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 UBE2D3P3-201ENST00000426992 425 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL11A1P12107 MOB1AP2-201ENST00000446060 614 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL11A1P12107 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.92□□□□□ -2.1
COL11A1P12107 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.92□□□□□ -2.1
COL11A1P12107 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.92□□□□□ -2.1
COL11A1P12107 AC068781.1-201ENST00000488231 618 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 RNF138P1-201ENST00000502765 546 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.92□□□□□ -2.1
COL11A1P12107 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.92□□□□□ -2.1
COL11A1P12107 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.92□□□□□ -2.1
COL11A1P12107 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.92□□□□□ -2.1
COL11A1P12107 SUMO2P14-201ENST00000604488 293 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 AP001033.2-201ENST00000609701 1003 ntBASIC1.92□□□□□ -2.1
COL11A1P12107 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.92□□□□□ -2.1
COL11A1P12107 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
COL11A1P12107 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL11A1P12107 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL11A1P12107 RNU6-481P-201ENST00000384194 107 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 TAS2R15P-201ENST00000390674 928 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 AC092745.2-202ENST00000411880 369 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.91□□□□□ -2.1
COL11A1P12107 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.91□□□□□ -2.1
COL11A1P12107 AL512661.1-201ENST00000434586 1253 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 SNRPEP4-201ENST00000435815 279 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 RNFT1P2-201ENST00000443064 757 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.91□□□□□ -2.1
COL11A1P12107 MTCO2P9-201ENST00000503214 694 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL11A1P12107 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.91□□□□□ -2.1
COL11A1P12107 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.91□□□□□ -2.1
COL11A1P12107 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 SNORA31.13-201ENST00000516624 135 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.91□□□□□ -2.1
COL11A1P12107 HSPE1P20-201ENST00000538133 289 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.91□□□□□ -2.1
COL11A1P12107 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.91□□□□□ -2.1
COL11A1P12107 AC095057.3-201ENST00000567102 1157 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 AC018618.2-201ENST00000604770 446 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 AC019159.1-201ENST00000605094 187 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 AF129408.1-201ENST00000608767 431 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL11A1P12107 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
COL11A1P12107 AP002907.1-201ENST00000606361 1430 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.91□□□□□ -2.1
COL11A1P12107 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL11A1P12107 AL139276.1-201ENST00000311910 1001 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 RNA5SP27-201ENST00000363839 119 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 RNU6-796P-201ENST00000391086 107 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.91□□□□□ -2.1
COL11A1P12107 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.91□□□□□ -2.1
COL11A1P12107 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.91□□□□□ -2.1
COL11A1P12107 DPPA3P1-201ENST00000448050 469 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL11A1P12107 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.91□□□□□ -2.1
COL11A1P12107 TRMT112P2-201ENST00000512910 132 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 SNORA76.2-201ENST00000517095 137 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.91□□□□□ -2.1
COL11A1P12107 SNORD84-203ENST00000584275 78 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 AP002906.1-201ENST00000603405 233 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 BX248123.2-201ENST00000606318 124 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 AC006249.1-201ENST00000621223 471 ntBASIC1.91□□□□□ -2.1
COL11A1P12107 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.91□□□□□ -2.1
COL11A1P12107 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
COL11A1P12107 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.9□□□□□ -2.1
COL11A1P12107 SNORA63.3-201ENST00000362682 132 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 Y_RNA.540-201ENST00000384638 111 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 RNU2-68P-201ENST00000410878 191 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 RNU4-74P-201ENST00000411280 161 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.9□□□□□ -2.11
COL11A1P12107 TATDN1P1-201ENST00000414123 891 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AL158050.1-201ENST00000416077 457 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 HSPE1P1-201ENST00000421494 318 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.9□□□□□ -2.11
COL11A1P12107 RPL7P29-201ENST00000437151 728 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.9□□□□□ -2.11
COL11A1P12107 GTF2IP12-201ENST00000456547 356 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AC008379.1-201ENST00000463655 464 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AC055855.1-201ENST00000489563 579 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AC008427.1-201ENST00000503102 655 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 SNORA31.8-201ENST00000516327 108 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 IGKV2D-36-201ENST00000518643 226 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms