Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
MMP3P08254 AC005832.2-201ENST00000538921 1430 ntBASIC3.7□□□□□ -1.82
MMP3P08254 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MMP3P08254 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.7□□□□□ -1.82
MMP3P08254 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AC011460.1-201ENST00000636268 1834 ntBASIC3.7□□□□□ -1.82
MMP3P08254 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.7□□□□□ -1.82
MMP3P08254 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.7□□□□□ -1.82
MMP3P08254 AL079305.1-201ENST00000623159 3008 ntBASIC3.7□□□□□ -1.82
MMP3P08254 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MMP3P08254 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.7□□□□□ -1.82
MMP3P08254 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.7□□□□□ -1.82
MMP3P08254 AC236972.1-201ENST00000433225 199 ntBASIC3.7□□□□□ -1.82
MMP3P08254 USP9YP7-201ENST00000436723 430 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
MMP3P08254 RAC1P7-201ENST00000445367 377 ntBASIC3.7□□□□□ -1.82
MMP3P08254 MTND1P1-201ENST00000445453 368 ntBASIC3.7□□□□□ -1.82
MMP3P08254 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.7□□□□□ -1.82
MMP3P08254 TPT1P14-201ENST00000448018 505 ntBASIC3.7□□□□□ -1.82
MMP3P08254 USP9YP32-201ENST00000452432 430 ntBASIC3.7□□□□□ -1.82
MMP3P08254 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.7□□□□□ -1.82
MMP3P08254 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.7□□□□□ -1.82
MMP3P08254 snoU13.3-201ENST00000459441 104 ntBASIC3.7□□□□□ -1.82
MMP3P08254 RBM43P1-201ENST00000476891 1081 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AC109925.1-201ENST00000478069 331 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AC091133.4-201ENST00000511142 308 ntBASIC3.7□□□□□ -1.82
MMP3P08254 RNU6-506P-201ENST00000516553 94 ntBASIC3.7□□□□□ -1.82
MMP3P08254 SNORA70.19-201ENST00000516717 90 ntBASIC3.7□□□□□ -1.82
MMP3P08254 MTCO2P4-201ENST00000517968 247 ntBASIC3.7□□□□□ -1.82
MMP3P08254 OR5G4P-201ENST00000525251 760 ntBASIC3.7□□□□□ -1.82
MMP3P08254 DEFB108A-201ENST00000530110 222 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AL133271.1-201ENST00000538229 291 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AC004024.1-201ENST00000549244 247 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.7□□□□□ -1.82
MMP3P08254 HIGD1AP1-201ENST00000550979 275 ntBASIC3.7□□□□□ -1.82
MMP3P08254 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.7□□□□□ -1.82
MMP3P08254 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.7□□□□□ -1.82
MMP3P08254 OR4K8P-201ENST00000578842 1048 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.7□□□□□ -1.82
MMP3P08254 AP003465.2-201ENST00000602571 373 ntBASIC3.7□□□□□ -1.82
MMP3P08254 DUXAP4-201ENST00000603046 613 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AL022154.1-201ENST00000604698 785 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AC121334.2-201ENST00000605387 271 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AC092794.1-201ENST00000612734 582 ntBASIC3.7□□□□□ -1.82
MMP3P08254 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.7□□□□□ -1.82
MMP3P08254 AL158209.2-201ENST00000619266 216 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AL356321.1-201ENST00000621360 228 ntBASIC3.7□□□□□ -1.82
MMP3P08254 AL157786.1-207ENST00000627771 695 ntBASIC3.7□□□□□ -1.82
MMP3P08254 CEP170P1-201ENST00000502249 4587 ntBASIC3.7□□□□□ -1.82
MMP3P08254 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.7□□□□□ -1.82
MMP3P08254 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
MMP3P08254 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MMP3P08254 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MMP3P08254 AL513302.2-201ENST00000562313 1842 ntBASIC3.7□□□□□ -1.82
MMP3P08254 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.7□□□□□ -1.82
MMP3P08254 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.7□□□□□ -1.82
MMP3P08254 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.69□□□□□ -1.82
MMP3P08254 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
MMP3P08254 AC093908.1-201ENST00000623125 8092 ntBASIC3.69□□□□□ -1.82
MMP3P08254 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
MMP3P08254 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MMP3P08254 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
MMP3P08254 AC027287.1-201ENST00000553115 1453 ntBASIC3.69□□□□□ -1.82
MMP3P08254 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
MMP3P08254 RNU6-1249P-201ENST00000363237 111 ntBASIC3.69□□□□□ -1.82
MMP3P08254 Y_RNA.296-201ENST00000364930 108 ntBASIC3.69□□□□□ -1.82
MMP3P08254 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.69□□□□□ -1.82
MMP3P08254 RNU6-359P-201ENST00000365466 108 ntBASIC3.69□□□□□ -1.82
MMP3P08254 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.69□□□□□ -1.82
MMP3P08254 Y_RNA.500-201ENST00000384466 111 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AC127391.1-201ENST00000411737 98 ntBASIC3.69□□□□□ -1.82
MMP3P08254 RPS15AP12-201ENST00000419498 388 ntBASIC3.69□□□□□ -1.82
MMP3P08254 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.69□□□□□ -1.82
MMP3P08254 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.69□□□□□ -1.82
MMP3P08254 AC006548.1-201ENST00000427470 102 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.69□□□□□ -1.82
MMP3P08254 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.69□□□□□ -1.82
MMP3P08254 RABEPKP1-201ENST00000440529 1026 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AC093392.2-201ENST00000450682 337 ntBASIC3.69□□□□□ -1.82
MMP3P08254 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.69□□□□□ -1.82
MMP3P08254 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.69□□□□□ -1.82
MMP3P08254 HMGN2P7-201ENST00000456186 273 ntBASIC3.69□□□□□ -1.82
MMP3P08254 RPL27AP5-201ENST00000469428 449 ntBASIC3.69□□□□□ -1.82
MMP3P08254 ST13P14-201ENST00000474095 734 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.69□□□□□ -1.82
MMP3P08254 AC010587.1-201ENST00000505809 469 ntBASIC3.69□□□□□ -1.82
MMP3P08254 RPL23AP94-201ENST00000512518 302 ntBASIC3.69□□□□□ -1.82
MMP3P08254 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.69□□□□□ -1.82
MMP3P08254 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.69□□□□□ -1.82
MMP3P08254 RNA5SP341-201ENST00000516261 117 ntBASIC3.69□□□□□ -1.82
MMP3P08254 RNU6-314P-201ENST00000516574 104 ntBASIC3.69□□□□□ -1.82
MMP3P08254 RNU6-528P-201ENST00000516926 100 ntBASIC3.69□□□□□ -1.82
MMP3P08254 RNU6-1220P-201ENST00000517126 108 ntBASIC3.69□□□□□ -1.82
MMP3P08254 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.69□□□□□ -1.82
MMP3P08254 CR383656.7-201ENST00000548164 174 ntBASIC3.69□□□□□ -1.82
MMP3P08254 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.69□□□□□ -1.82
MMP3P08254 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.69□□□□□ -1.82
MMP3P08254 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
MMP3P08254 AL391840.1-201ENST00000571144 367 ntBASIC3.69□□□□□ -1.82
MMP3P08254 MTATP6P3-201ENST00000581686 676 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms