Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL356583.2-201ENST00000426536 280 ntBASIC3.64□□□□□ -1.83
RTN3O95197 TRIAP1P1-201ENST00000427062 225 ntBASIC3.64□□□□□ -1.83
RTN3O95197 RPL23AP69-201ENST00000431134 458 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AL590664.1-201ENST00000448065 339 ntBASIC3.64□□□□□ -1.83
RTN3O95197 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RTN3O95197 Y_RNA.688-201ENST00000516565 95 ntBASIC3.64□□□□□ -1.83
RTN3O95197 RNU6-64P-201ENST00000517119 105 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.64□□□□□ -1.83
RTN3O95197 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.64□□□□□ -1.83
RTN3O95197 AC022878.1-201ENST00000530684 149 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.64□□□□□ -1.83
RTN3O95197 AC123904.3-201ENST00000547218 814 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.64□□□□□ -1.83
RTN3O95197 MIR3146-201ENST00000580367 79 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.64□□□□□ -1.83
RTN3O95197 AC013553.2-201ENST00000604244 589 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AC112191.3-201ENST00000604371 277 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AC004696.1-201ENST00000614345 607 ntBASIC3.64□□□□□ -1.83
RTN3O95197 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AC092140.2-201ENST00000618027 521 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.64□□□□□ -1.83
RTN3O95197 AC009878.1-201ENST00000621819 340 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AC006111.3-201ENST00000622137 383 ntBASIC3.64□□□□□ -1.83
RTN3O95197 AC068057.2-201ENST00000624047 895 ntBASIC3.64□□□□□ -1.83
RTN3O95197 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.64□□□□□ -1.83
RTN3O95197 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RTN3O95197 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.64□□□□□ -1.83
RTN3O95197 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTN3O95197 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTN3O95197 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
RTN3O95197 RNU1-75P-201ENST00000347264 129 ntBASIC3.63□□□□□ -1.83
RTN3O95197 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN3O95197 FCF1P10-201ENST00000407590 479 ntBASIC3.63□□□□□ -1.83
RTN3O95197 RN7SKP140-201ENST00000411196 284 ntBASIC3.63□□□□□ -1.83
RTN3O95197 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.63□□□□□ -1.83
RTN3O95197 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.63□□□□□ -1.83
RTN3O95197 OR2B8P-201ENST00000432841 938 ntBASIC3.63□□□□□ -1.83
RTN3O95197 BX679664.1-201ENST00000434429 253 ntBASIC3.63□□□□□ -1.83
RTN3O95197 RPL23AP22-201ENST00000437556 453 ntBASIC3.63□□□□□ -1.83
RTN3O95197 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN3O95197 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.63□□□□□ -1.83
RTN3O95197 RPL30P14-201ENST00000482744 348 ntBASIC3.63□□□□□ -1.83
RTN3O95197 AL358832.1-201ENST00000497800 389 ntBASIC3.63□□□□□ -1.83
RTN3O95197 FCF1P8-201ENST00000510322 597 ntBASIC3.63□□□□□ -1.83
RTN3O95197 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN3O95197 RNU6-390P-201ENST00000516259 103 ntBASIC3.63□□□□□ -1.83
RTN3O95197 NRON-201ENST00000517270 370 ntBASIC3.63□□□□□ -1.83
RTN3O95197 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.63□□□□□ -1.83
RTN3O95197 AC068657.1-201ENST00000520807 306 ntBASIC3.63□□□□□ -1.83
RTN3O95197 AC026333.2-201ENST00000542164 106 ntBASIC3.63□□□□□ -1.83
RTN3O95197 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.63□□□□□ -1.83
RTN3O95197 TGIF1P1-201ENST00000558095 802 ntBASIC3.63□□□□□ -1.83
RTN3O95197 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.63□□□□□ -1.83
RTN3O95197 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN3O95197 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN3O95197 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.63□□□□□ -1.83
RTN3O95197 AC008277.2-201ENST00000605196 797 ntBASIC3.63□□□□□ -1.83
RTN3O95197 AC108747.1-201ENST00000609508 535 ntBASIC3.63□□□□□ -1.83
RTN3O95197 SNHG22-203ENST00000617833 660 ntBASIC3.63□□□□□ -1.83
RTN3O95197 AC025048.6-202ENST00000627667 438 ntBASIC3.63□□□□□ -1.83
RTN3O95197 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTN3O95197 AC068647.1-201ENST00000489539 2265 ntBASIC3.63□□□□□ -1.83
RTN3O95197 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTN3O95197 MTND5P1-201ENST00000445440 1375 ntBASIC3.63□□□□□ -1.83
RTN3O95197 TPTE2P4-201ENST00000258589 1605 ntBASIC3.62□□□□□ -1.83
RTN3O95197 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
RTN3O95197 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
RTN3O95197 DYNLT3P1-201ENST00000378574 347 ntBASIC3.62□□□□□ -1.83
RTN3O95197 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RTN3O95197 Y_RNA.598-201ENST00000410480 95 ntBASIC3.62□□□□□ -1.83
RTN3O95197 RNU2-62P-201ENST00000410868 191 ntBASIC3.62□□□□□ -1.83
RTN3O95197 AL513331.1-201ENST00000411908 397 ntBASIC3.62□□□□□ -1.83
RTN3O95197 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.62□□□□□ -1.83
RTN3O95197 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.62□□□□□ -1.83
RTN3O95197 ELOCP17-201ENST00000414751 326 ntBASIC3.62□□□□□ -1.83
RTN3O95197 USP9YP36-201ENST00000424581 829 ntBASIC3.62□□□□□ -1.83
RTN3O95197 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.62□□□□□ -1.83
RTN3O95197 AC244035.1-201ENST00000430042 390 ntBASIC3.62□□□□□ -1.83
RTN3O95197 AC092573.2-201ENST00000434546 243 ntBASIC3.62□□□□□ -1.83
RTN3O95197 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.62□□□□□ -1.83
RTN3O95197 AC129850.1-201ENST00000436203 508 ntBASIC3.62□□□□□ -1.83
RTN3O95197 RPS3AP12-201ENST00000443616 753 ntBASIC3.62□□□□□ -1.83
RTN3O95197 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.62□□□□□ -1.83
RTN3O95197 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.62□□□□□ -1.83
RTN3O95197 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.62□□□□□ -1.83
RTN3O95197 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN3O95197 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN3O95197 RN7SL601P-201ENST00000471221 293 ntBASIC3.62□□□□□ -1.83
RTN3O95197 AC010631.1-201ENST00000474150 156 ntBASIC3.62□□□□□ -1.83
RTN3O95197 OR5BM1P-201ENST00000512021 366 ntBASIC3.62□□□□□ -1.83
RTN3O95197 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.62□□□□□ -1.83
RTN3O95197 IGKV2-26-201ENST00000518305 343 ntBASIC3.62□□□□□ -1.83
RTN3O95197 AP006245.1-201ENST00000522549 120 ntBASIC3.62□□□□□ -1.83
RTN3O95197 OR5G4P-201ENST00000525251 760 ntBASIC3.62□□□□□ -1.83
RTN3O95197 CASP1P1-201ENST00000526345 212 ntBASIC3.62□□□□□ -1.83
RTN3O95197 AP002748.2-201ENST00000528671 348 ntBASIC3.62□□□□□ -1.83
RTN3O95197 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.62□□□□□ -1.83
RTN3O95197 AC093012.1-202ENST00000549403 582 ntBASIC3.62□□□□□ -1.83
RTN3O95197 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTN3O95197 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms