Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC109329.2-201ENST00000519658 482 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 HSPA8P13-201ENST00000523715 472 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AC121758.2-201ENST00000553271 193 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AL132657.2-201ENST00000564417 358 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.38□□□□□ -2.03
SEMA3DO95025 DNAJC19P3-201ENST00000594491 331 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AL356280.1-201ENST00000603614 379 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 AP002371.2-201ENST00000624450 503 ntBASIC2.38□□□□□ -2.03
SEMA3DO95025 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SEMA3DO95025 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SEMA3DO95025 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SEMA3DO95025 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SEMA3DO95025 SNORA80E-201ENST00000384744 137 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 MIR634-201ENST00000385208 97 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SEMA3DO95025 RPL17P50-201ENST00000396131 546 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 AL355143.1-201ENST00000407101 841 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 RPS3AP24-201ENST00000407896 734 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 U3.37-201ENST00000408528 213 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.37□□□□□ -2.03
SEMA3DO95025 AL139421.1-201ENST00000423010 169 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.37□□□□□ -2.03
SEMA3DO95025 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.37□□□□□ -2.03
SEMA3DO95025 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.37□□□□□ -2.03
SEMA3DO95025 NDUFB4P6-201ENST00000436819 366 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SEMA3DO95025 RPL26P6-201ENST00000440913 438 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 RPL23AP76-201ENST00000441860 458 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 AC104164.3-201ENST00000467363 1258 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 AL135752.1-201ENST00000479477 471 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.37□□□□□ -2.03
SEMA3DO95025 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.37□□□□□ -2.03
SEMA3DO95025 AC107222.1-201ENST00000510899 637 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.37□□□□□ -2.03
SEMA3DO95025 AC008837.2-201ENST00000513076 418 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 RN7SKP24-201ENST00000515888 284 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 RNY4P37-201ENST00000516225 96 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 CASP1P1-201ENST00000526345 212 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.37□□□□□ -2.03
SEMA3DO95025 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.37□□□□□ -2.03
SEMA3DO95025 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.37□□□□□ -2.03
SEMA3DO95025 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SEMA3DO95025 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.37□□□□□ -2.03
SEMA3DO95025 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.37□□□□□ -2.03
SEMA3DO95025 AL390208.1-201ENST00000605885 644 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 AC080013.4-201ENST00000607624 649 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 AC090772.4-201ENST00000623599 362 ntBASIC2.37□□□□□ -2.03
SEMA3DO95025 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.37□□□□□ -2.03
SEMA3DO95025 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SEMA3DO95025 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SEMA3DO95025 AC012321.1-201ENST00000561622 1588 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SEMA3DO95025 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SEMA3DO95025 RNU6-1122P-201ENST00000384449 107 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 SNORA41-201ENST00000384675 132 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 NDUFB4P4-201ENST00000404822 243 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 RPL7L1P10-201ENST00000427790 463 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AL445687.1-201ENST00000439946 251 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AL121871.1-201ENST00000443413 436 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AL592447.1-201ENST00000447592 540 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AL109933.2-201ENST00000452651 260 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 RPL18AP17-201ENST00000455326 198 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AL049829.1-201ENST00000465411 156 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 RN7SL432P-201ENST00000484057 298 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AC113347.3-201ENST00000509113 148 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 XKRY-201ENST00000510392 1100 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 RNA5SP320-201ENST00000516263 124 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.36□□□□□ -2.03
SEMA3DO95025 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.36□□□□□ -2.03
SEMA3DO95025 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AC007115.1-201ENST00000546853 234 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.36□□□□□ -2.03
SEMA3DO95025 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AC105224.1-201ENST00000587055 421 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.36□□□□□ -2.03
SEMA3DO95025 AP000254.1-201ENST00000609934 520 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 DUXAP10-204ENST00000612052 616 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AL450472.3-201ENST00000615578 367 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AC006213.4-201ENST00000616184 634 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AC079597.1-201ENST00000624306 508 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AC004808.1-201ENST00000627671 721 ntBASIC2.36□□□□□ -2.03
SEMA3DO95025 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.36□□□□□ -2.03
SEMA3DO95025 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SEMA3DO95025 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SEMA3DO95025 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
SEMA3DO95025 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SEMA3DO95025 RNU6-28P-201ENST00000362378 107 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms