Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TPMTP3-201ENST00000411928 735 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 RPS15AP7-201ENST00000439294 405 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 AC080014.1-201ENST00000496877 1201 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 AC113155.1-201ENST00000511141 769 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 RNU6-826P-201ENST00000516827 104 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 RNA5SP291-201ENST00000517222 105 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 AC005951.2-201ENST00000576282 495 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 AC011471.1-201ENST00000585766 187 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 VN1R83P-201ENST00000595685 445 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 AC024560.3-201ENST00000608482 349 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 AC104985.3-201ENST00000623479 597 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 NACA3P-201ENST00000359690 648 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 RNU1-112P-201ENST00000364401 164 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 SNORA23-201ENST00000365128 182 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 MIR9-1-201ENST00000385198 89 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AL592148.1-201ENST00000413568 445 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC091390.3-201ENST00000426478 338 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AP000949.1-201ENST00000438328 629 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 ST13P20-201ENST00000447996 1065 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC008571.1-201ENST00000467232 300 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 KC877373.1-201ENST00000479066 408 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 RNA5SP367-201ENST00000516557 118 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 COX6CP5-201ENST00000527162 228 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AL391261.3-201ENST00000557194 520 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC087465.1-201ENST00000560574 245 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AL512347.1-201ENST00000566420 503 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 HMGN2P15-201ENST00000585707 270 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC245517.5-201ENST00000611529 162 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC104763.3-201ENST00000613765 618 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 AC006378.2-201ENST00000623178 2476 ntBASIC2.71□□□□□ -1.98
LRRC40Q9H9A6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 RNU6-1257P-201ENST00000384625 110 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 MIR491-201ENST00000384877 84 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AL109755.1-201ENST00000401791 649 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AL122016.1-201ENST00000403365 367 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AC098614.2-201ENST00000426040 255 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 ZNF863P-201ENST00000426746 417 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AC006946.1-201ENST00000429106 328 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 MTND5P14-201ENST00000441481 1267 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 DPPA3P1-201ENST00000448050 469 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 ATG12P2-201ENST00000456830 416 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AC126182.1-201ENST00000478134 357 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 CDC42P4-201ENST00000510507 563 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 RNU6-150P-201ENST00000516237 95 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AC025281.1-201ENST00000567026 265 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AC138761.3-201ENST00000579993 334 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AL353997.4-201ENST00000586196 166 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AL451007.1-201ENST00000595491 289 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 NRBF2P5-201ENST00000603087 788 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 AP000787.2-201ENST00000604432 568 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 BX664608.1-201ENST00000610519 487 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 DDX10P1-201ENST00000448545 1933 ntBASIC2.7□□□□□ -1.98
LRRC40Q9H9A6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 CCT4P2-201ENST00000233836 1548 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 RNU6-461P-201ENST00000364195 107 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 RNA5SP387-201ENST00000364226 106 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 SNORA68.1-201ENST00000364537 132 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 RNU1-100P-201ENST00000365255 165 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 RNU1-39P-201ENST00000383897 165 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 MIR128-1-201ENST00000384921 82 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AL513475.1-201ENST00000406602 315 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 RNA5SP80-201ENST00000410475 111 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 RNU6-516P-201ENST00000411381 104 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 HMGN2P35-201ENST00000412164 270 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms