Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RPS26P8-201ENST00000393490 348 ntBASIC3.69□□□□□ -1.82
RAE1P78406 OR9R1P-201ENST00000412200 877 ntBASIC3.69□□□□□ -1.82
RAE1P78406 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.69□□□□□ -1.82
RAE1P78406 MTATP6P4-201ENST00000427725 675 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.69□□□□□ -1.82
RAE1P78406 AL121601.2-201ENST00000438019 707 ntBASIC3.69□□□□□ -1.82
RAE1P78406 CYCSP43-201ENST00000438233 310 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.69□□□□□ -1.82
RAE1P78406 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.69□□□□□ -1.82
RAE1P78406 MTND5P20-201ENST00000448677 143 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AC073415.1-201ENST00000449240 153 ntBASIC3.69□□□□□ -1.82
RAE1P78406 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.69□□□□□ -1.82
RAE1P78406 RPS24P6-201ENST00000452670 400 ntBASIC3.69□□□□□ -1.82
RAE1P78406 RNU7-182P-201ENST00000459009 62 ntBASIC3.69□□□□□ -1.82
RAE1P78406 RPS23P7-201ENST00000466210 444 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AC006512.1-201ENST00000468816 291 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AP000926.1-201ENST00000479573 241 ntBASIC3.69□□□□□ -1.82
RAE1P78406 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.69□□□□□ -1.82
RAE1P78406 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.69□□□□□ -1.82
RAE1P78406 Vault.1-201ENST00000516474 102 ntBASIC3.69□□□□□ -1.82
RAE1P78406 Y_RNA.702-201ENST00000516843 96 ntBASIC3.69□□□□□ -1.82
RAE1P78406 SNORD60.2-201ENST00000516883 86 ntBASIC3.69□□□□□ -1.82
RAE1P78406 SNORA31.22-201ENST00000517204 135 ntBASIC3.69□□□□□ -1.82
RAE1P78406 ERHP1-201ENST00000523006 310 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.69□□□□□ -1.82
RAE1P78406 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.69□□□□□ -1.82
RAE1P78406 AC093012.1-202ENST00000549403 582 ntBASIC3.69□□□□□ -1.82
RAE1P78406 HIF1AP1-201ENST00000553642 175 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.69□□□□□ -1.82
RAE1P78406 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.69□□□□□ -1.82
RAE1P78406 AC012182.1-201ENST00000570133 895 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AC004696.1-201ENST00000614345 607 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AC083809.1-201ENST00000615051 472 ntBASIC3.69□□□□□ -1.82
RAE1P78406 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.69□□□□□ -1.82
RAE1P78406 AC110801.1-201ENST00000623590 212 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AC112484.5-201ENST00000624189 228 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.69□□□□□ -1.82
RAE1P78406 AC024614.3-201ENST00000637860 256 ntBASIC3.69□□□□□ -1.82
RAE1P78406 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
RAE1P78406 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAE1P78406 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAE1P78406 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAE1P78406 AC010300.1-201ENST00000600671 5134 ntBASIC3.69□□□□□ -1.82
RAE1P78406 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.69□□□□□ -1.82
RAE1P78406 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RAE1P78406 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RAE1P78406 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RAE1P78406 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RAE1P78406 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RAE1P78406 RNU6-179P-201ENST00000363350 107 ntBASIC3.68□□□□□ -1.82
RAE1P78406 SNORA62.1-201ENST00000364287 154 ntBASIC3.68□□□□□ -1.82
RAE1P78406 SNORA70C-201ENST00000384538 135 ntBASIC3.68□□□□□ -1.82
RAE1P78406 MIR141-201ENST00000384975 95 ntBASIC3.68□□□□□ -1.82
RAE1P78406 HMGN2P8-201ENST00000391458 268 ntBASIC3.68□□□□□ -1.82
RAE1P78406 HLFP1-201ENST00000402375 499 ntBASIC3.68□□□□□ -1.82
RAE1P78406 AL136116.1-201ENST00000403591 381 ntBASIC3.68□□□□□ -1.82
RAE1P78406 TXNP7-201ENST00000406296 293 ntBASIC3.68□□□□□ -1.82
RAE1P78406 AL356776.1-201ENST00000406574 447 ntBASIC3.68□□□□□ -1.82
RAE1P78406 RNU6-1068P-201ENST00000410958 103 ntBASIC3.68□□□□□ -1.82
RAE1P78406 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.68□□□□□ -1.82
RAE1P78406 MTCO1P39-201ENST00000426148 480 ntBASIC3.68□□□□□ -1.82
RAE1P78406 AC079780.1-201ENST00000428259 207 ntBASIC3.68□□□□□ -1.82
RAE1P78406 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.68□□□□□ -1.82
RAE1P78406 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.68□□□□□ -1.82
RAE1P78406 RPS29P15-201ENST00000458329 171 ntBASIC3.68□□□□□ -1.82
RAE1P78406 AC010285.1-201ENST00000470580 392 ntBASIC3.68□□□□□ -1.82
RAE1P78406 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RAE1P78406 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.68□□□□□ -1.82
RAE1P78406 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.68□□□□□ -1.82
RAE1P78406 AC084198.1-201ENST00000477747 402 ntBASIC3.68□□□□□ -1.82
RAE1P78406 PPIAP15-201ENST00000479662 484 ntBASIC3.68□□□□□ -1.82
RAE1P78406 TRBV12-2-201ENST00000489763 344 ntBASIC3.68□□□□□ -1.82
RAE1P78406 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.68□□□□□ -1.82
RAE1P78406 RNA5SP143-201ENST00000516936 115 ntBASIC3.68□□□□□ -1.82
RAE1P78406 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.68□□□□□ -1.82
RAE1P78406 OR4H12P-201ENST00000556269 907 ntBASIC3.68□□□□□ -1.82
RAE1P78406 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.68□□□□□ -1.82
RAE1P78406 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.68□□□□□ -1.82
RAE1P78406 MIR4775-201ENST00000581168 75 ntBASIC3.68□□□□□ -1.82
RAE1P78406 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.68□□□□□ -1.82
RAE1P78406 AC005255.1-201ENST00000593748 216 ntBASIC3.68□□□□□ -1.82
RAE1P78406 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.68□□□□□ -1.82
RAE1P78406 AC130324.3-201ENST00000614165 542 ntBASIC3.68□□□□□ -1.82
RAE1P78406 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RAE1P78406 AC079684.1-201ENST00000621405 437 ntBASIC3.68□□□□□ -1.82
RAE1P78406 AL360181.4-201ENST00000621752 134 ntBASIC3.68□□□□□ -1.82
RAE1P78406 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.68□□□□□ -1.82
RAE1P78406 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.68□□□□□ -1.82
RAE1P78406 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.68□□□□□ -1.82
RAE1P78406 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RAE1P78406 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RAE1P78406 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.68□□□□□ -1.82
RAE1P78406 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.68□□□□□ -1.82
RAE1P78406 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RAE1P78406 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RAE1P78406 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RAE1P78406 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RAE1P78406 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.67□□□□□ -1.82
RAE1P78406 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RAE1P78406 RIOK3P1-201ENST00000418778 1528 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms