Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.43□□□□□ -2.02
VSX2P58304 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
VSX2P58304 AC105224.1-201ENST00000587055 421 ntBASIC2.43□□□□□ -2.02
VSX2P58304 GLUD1P4-201ENST00000590914 418 ntBASIC2.43□□□□□ -2.02
VSX2P58304 RPL23AP78-201ENST00000599928 470 ntBASIC2.43□□□□□ -2.02
VSX2P58304 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.43□□□□□ -2.02
VSX2P58304 AP002826.1-201ENST00000608835 315 ntBASIC2.43□□□□□ -2.02
VSX2P58304 AP000254.1-201ENST00000609934 520 ntBASIC2.43□□□□□ -2.02
VSX2P58304 TUG1_1.1-201ENST00000610654 145 ntBASIC2.43□□□□□ -2.02
VSX2P58304 AL138478.1-201ENST00000612252 832 ntBASIC2.43□□□□□ -2.02
VSX2P58304 AL596245.1-201ENST00000618994 362 ntBASIC2.43□□□□□ -2.02
VSX2P58304 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
VSX2P58304 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
VSX2P58304 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.43□□□□□ -2.02
VSX2P58304 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VSX2P58304 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VSX2P58304 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VSX2P58304 RNA5SP139-201ENST00000364340 117 ntBASIC2.42□□□□□ -2.02
VSX2P58304 SNORD116-12-201ENST00000384468 92 ntBASIC2.42□□□□□ -2.02
VSX2P58304 MIR27B-201ENST00000385129 97 ntBASIC2.42□□□□□ -2.02
VSX2P58304 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VSX2P58304 TPMTP2-201ENST00000414372 726 ntBASIC2.42□□□□□ -2.02
VSX2P58304 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.42□□□□□ -2.02
VSX2P58304 BX119904.4-201ENST00000424402 301 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.42□□□□□ -2.02
VSX2P58304 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.42□□□□□ -2.02
VSX2P58304 AC090774.1-201ENST00000435925 246 ntBASIC2.42□□□□□ -2.02
VSX2P58304 ST13P20-201ENST00000447996 1065 ntBASIC2.42□□□□□ -2.02
VSX2P58304 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.42□□□□□ -2.02
VSX2P58304 RPS3P1-201ENST00000456781 192 ntBASIC2.42□□□□□ -2.02
VSX2P58304 RNU7-136P-201ENST00000458819 69 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC147055.4-201ENST00000504399 745 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.42□□□□□ -2.02
VSX2P58304 AC096571.1-202ENST00000506634 735 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC113347.3-201ENST00000509113 148 ntBASIC2.42□□□□□ -2.02
VSX2P58304 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
VSX2P58304 AC006499.2-201ENST00000513470 337 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.42□□□□□ -2.02
VSX2P58304 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.42□□□□□ -2.02
VSX2P58304 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.42□□□□□ -2.02
VSX2P58304 RN7SKP24-201ENST00000515888 284 ntBASIC2.42□□□□□ -2.02
VSX2P58304 RNA5SP320-201ENST00000516263 124 ntBASIC2.42□□□□□ -2.02
VSX2P58304 RPPH1-2P-201ENST00000516688 293 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.42□□□□□ -2.02
VSX2P58304 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.42□□□□□ -2.02
VSX2P58304 LRRC6P1-201ENST00000532188 885 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.42□□□□□ -2.02
VSX2P58304 AC005832.3-201ENST00000537929 631 ntBASIC2.42□□□□□ -2.02
VSX2P58304 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.42□□□□□ -2.02
VSX2P58304 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.42□□□□□ -2.02
VSX2P58304 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.42□□□□□ -2.02
VSX2P58304 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.42□□□□□ -2.02
VSX2P58304 DNAJC19P3-201ENST00000594491 331 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.42□□□□□ -2.02
VSX2P58304 NUTF2P8-201ENST00000604593 363 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC024560.3-201ENST00000608482 349 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC104763.3-201ENST00000613765 618 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AL590099.1-201ENST00000615276 138 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC090132.2-201ENST00000615881 347 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC010297.1-201ENST00000623948 149 ntBASIC2.42□□□□□ -2.02
VSX2P58304 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.42□□□□□ -2.02
VSX2P58304 AC004808.1-201ENST00000627671 721 ntBASIC2.42□□□□□ -2.02
VSX2P58304 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.42□□□□□ -2.02
VSX2P58304 LINC02211-204ENST00000642024 1070 ntBASIC2.42□□□□□ -2.02
VSX2P58304 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VSX2P58304 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VSX2P58304 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.41□□□□□ -2.02
VSX2P58304 AC026241.1-201ENST00000517873 2142 ntBASIC2.41□□□□□ -2.02
VSX2P58304 DEFB108F-201ENST00000344638 222 ntBASIC2.41□□□□□ -2.02
VSX2P58304 RNU6-270P-201ENST00000364131 105 ntBASIC2.41□□□□□ -2.02
VSX2P58304 U3.12-201ENST00000364498 214 ntBASIC2.41□□□□□ -2.02
VSX2P58304 RNU1-100P-201ENST00000365255 165 ntBASIC2.41□□□□□ -2.02
VSX2P58304 SNORA1.3-201ENST00000384676 136 ntBASIC2.41□□□□□ -2.02
VSX2P58304 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VSX2P58304 RNU6-1176P-201ENST00000390955 107 ntBASIC2.41□□□□□ -2.02
VSX2P58304 RNU6-1197P-201ENST00000391183 107 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AC080125.1-201ENST00000414888 684 ntBASIC2.41□□□□□ -2.02
VSX2P58304 Z75741.2-201ENST00000417272 1167 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AL513175.2-201ENST00000422071 443 ntBASIC2.41□□□□□ -2.02
VSX2P58304 SDCBPP1-201ENST00000440192 890 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AL592447.1-201ENST00000447592 540 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.41□□□□□ -2.02
VSX2P58304 BX322784.1-201ENST00000455793 1077 ntBASIC2.41□□□□□ -2.02
VSX2P58304 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.41□□□□□ -2.02
VSX2P58304 RPL30P9-201ENST00000465586 330 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AP000852.1-201ENST00000472460 573 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.41□□□□□ -2.02
VSX2P58304 RPL7P20-201ENST00000520308 745 ntBASIC2.41□□□□□ -2.02
VSX2P58304 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.41□□□□□ -2.02
VSX2P58304 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.41□□□□□ -2.02
VSX2P58304 DEFB108D-201ENST00000527787 222 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AP000867.2-201ENST00000532468 320 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.41□□□□□ -2.02
VSX2P58304 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.41□□□□□ -2.02
VSX2P58304 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VSX2P58304 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VSX2P58304 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.41□□□□□ -2.02
VSX2P58304 AC009097.3-201ENST00000563557 1018 ntBASIC2.41□□□□□ -2.02
VSX2P58304 MIR4435-1-201ENST00000582552 80 ntBASIC2.41□□□□□ -2.02
VSX2P58304 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms