Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RPL21P39-201ENST00000463605 483 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AC011979.1-201ENST00000472300 483 ntBASIC1.94□□□□□ -2.1
NUP98P52948 RPL21P93-201ENST00000480465 489 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AC233702.1-201ENST00000482905 502 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AL163540.1-201ENST00000485382 386 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AC093591.1-201ENST00000491435 481 ntBASIC1.94□□□□□ -2.1
NUP98P52948 RPS15AP36-201ENST00000492022 382 ntBASIC1.94□□□□□ -2.1
NUP98P52948 RPL21P16-201ENST00000495531 483 ntBASIC1.94□□□□□ -2.1
NUP98P52948 OR5BM1P-201ENST00000512021 366 ntBASIC1.94□□□□□ -2.1
NUP98P52948 RAC1P5-201ENST00000512182 576 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.94□□□□□ -2.1
NUP98P52948 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NUP98P52948 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.94□□□□□ -2.1
NUP98P52948 AL161629.2-201ENST00000615347 275 ntBASIC1.94□□□□□ -2.1
NUP98P52948 RPS4XP3-201ENST00000398541 413 ntBASIC1.93□□□□□ -2.1
NUP98P52948 AC092745.2-202ENST00000411880 369 ntBASIC1.93□□□□□ -2.1
NUP98P52948 TMEM167AP1-201ENST00000423409 219 ntBASIC1.93□□□□□ -2.1
NUP98P52948 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.93□□□□□ -2.1
NUP98P52948 AC010625.1-201ENST00000511296 403 ntBASIC1.93□□□□□ -2.1
NUP98P52948 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.93□□□□□ -2.1
NUP98P52948 RNA5SP82-201ENST00000516707 92 ntBASIC1.93□□□□□ -2.1
NUP98P52948 MTCO1P47-201ENST00000523889 1271 ntBASIC1.93□□□□□ -2.1
NUP98P52948 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.93□□□□□ -2.1
NUP98P52948 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.93□□□□□ -2.1
NUP98P52948 SUMO2P14-201ENST00000604488 293 ntBASIC1.93□□□□□ -2.1
NUP98P52948 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NUP98P52948 AC024595.1-201ENST00000623088 387 ntBASIC1.93□□□□□ -2.1
NUP98P52948 AC099654.7-201ENST00000635788 2127 ntBASIC1.93□□□□□ -2.1
NUP98P52948 ZNF734P-201ENST00000419494 1534 ntBASIC1.93□□□□□ -2.1
NUP98P52948 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
NUP98P52948 ZNF519P1-201ENST00000449011 1626 ntBASIC1.92□□□□□ -2.1
NUP98P52948 MTND4P8-201ENST00000514997 1362 ntBASIC1.92□□□□□ -2.1
NUP98P52948 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NUP98P52948 BX682237.1-201ENST00000415016 335 ntBASIC1.92□□□□□ -2.1
NUP98P52948 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.92□□□□□ -2.1
NUP98P52948 AC096632.1-201ENST00000427395 310 ntBASIC1.92□□□□□ -2.1
NUP98P52948 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.92□□□□□ -2.1
NUP98P52948 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.92□□□□□ -2.1
NUP98P52948 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.92□□□□□ -2.1
NUP98P52948 RNA5SP310-201ENST00000459084 116 ntBASIC1.92□□□□□ -2.1
NUP98P52948 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.92□□□□□ -2.1
NUP98P52948 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.92□□□□□ -2.1
NUP98P52948 DPRXP5-201ENST00000604662 539 ntBASIC1.92□□□□□ -2.1
NUP98P52948 AC135178.6-201ENST00000605314 398 ntBASIC1.92□□□□□ -2.1
NUP98P52948 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.92□□□□□ -2.1
NUP98P52948 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.92□□□□□ -2.1
NUP98P52948 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.92□□□□□ -2.1
NUP98P52948 AC068620.4-201ENST00000636730 1182 ntBASIC1.92□□□□□ -2.1
NUP98P52948 MAPK10-266ENST00000641066 6555 ntBASIC1.92□□□□□ -2.1
NUP98P52948 NUP58P1-201ENST00000502546 1738 ntBASIC1.92□□□□□ -2.1
NUP98P52948 RNU6-1226P-201ENST00000384317 107 ntBASIC1.91□□□□□ -2.1
NUP98P52948 MIR627-201ENST00000384979 97 ntBASIC1.91□□□□□ -2.1
NUP98P52948 AL136372.1-201ENST00000403060 228 ntBASIC1.91□□□□□ -2.1
NUP98P52948 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP98P52948 RPL7P37-201ENST00000425095 738 ntBASIC1.91□□□□□ -2.1
NUP98P52948 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.91□□□□□ -2.1
NUP98P52948 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.91□□□□□ -2.1
NUP98P52948 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP98P52948 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.91□□□□□ -2.1
NUP98P52948 TRMT112P2-201ENST00000512910 132 ntBASIC1.91□□□□□ -2.1
NUP98P52948 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
NUP98P52948 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.91□□□□□ -2.1
NUP98P52948 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP98P52948 AC092474.3-201ENST00000603022 568 ntBASIC1.91□□□□□ -2.1
NUP98P52948 AP001330.4-201ENST00000604350 154 ntBASIC1.91□□□□□ -2.1
NUP98P52948 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
NUP98P52948 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.91□□□□□ -2.1
NUP98P52948 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.91□□□□□ -2.1
NUP98P52948 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
NUP98P52948 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
NUP98P52948 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NUP98P52948 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
NUP98P52948 MIR517C-201ENST00000385103 95 ntBASIC1.91□□□□□ -2.1
NUP98P52948 UBE2V1P9-201ENST00000414760 368 ntBASIC1.91□□□□□ -2.1
NUP98P52948 UBE2D3P2-201ENST00000424409 445 ntBASIC1.91□□□□□ -2.1
NUP98P52948 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP98P52948 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.91□□□□□ -2.1
NUP98P52948 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.91□□□□□ -2.1
NUP98P52948 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.91□□□□□ -2.1
NUP98P52948 AC108734.3-201ENST00000481241 1165 ntBASIC1.91□□□□□ -2.1
NUP98P52948 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.91□□□□□ -2.1
NUP98P52948 PRELID3BP4-201ENST00000515476 571 ntBASIC1.91□□□□□ -2.1
NUP98P52948 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.91□□□□□ -2.1
NUP98P52948 AP001542.2-201ENST00000593141 364 ntBASIC1.91□□□□□ -2.1
NUP98P52948 AC245036.5-201ENST00000596330 847 ntBASIC1.91□□□□□ -2.1
NUP98P52948 AC107905.1-201ENST00000616204 426 ntBASIC1.91□□□□□ -2.1
NUP98P52948 AL109659.3-201ENST00000624985 950 ntBASIC1.91□□□□□ -2.1
NUP98P52948 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.91□□□□□ -2.1
NUP98P52948 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.9□□□□□ -2.11
NUP98P52948 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.9□□□□□ -2.11
NUP98P52948 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.9□□□□□ -2.11
NUP98P52948 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.9□□□□□ -2.11
NUP98P52948 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
NUP98P52948 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.9□□□□□ -2.11
NUP98P52948 HPVC1-201ENST00000629899 1198 ntBASIC1.9□□□□□ -2.11
NUP98P52948 BX649567.1-201ENST00000642071 1134 ntBASIC1.9□□□□□ -2.11
NUP98P52948 AC123912.3-201ENST00000600907 1367 ntBASIC1.9□□□□□ -2.11
NUP98P52948 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.89□□□□□ -2.11
NUP98P52948 RNU6-891P-201ENST00000384280 111 ntBASIC1.89□□□□□ -2.11
NUP98P52948 RNU1-57P-201ENST00000384491 166 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms