Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.24□□□□□ -1.89
PDX1P52945 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PDX1P52945 AP003181.2-201ENST00000528941 181 ntBASIC3.24□□□□□ -1.89
PDX1P52945 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.24□□□□□ -1.89
PDX1P52945 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.24□□□□□ -1.89
PDX1P52945 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.24□□□□□ -1.89
PDX1P52945 TGIF1P1-201ENST00000558095 802 ntBASIC3.24□□□□□ -1.89
PDX1P52945 AL157394.1-201ENST00000562983 1224 ntBASIC3.24□□□□□ -1.89
PDX1P52945 AC012182.1-201ENST00000570133 895 ntBASIC3.24□□□□□ -1.89
PDX1P52945 MIR3186-201ENST00000577404 85 ntBASIC3.24□□□□□ -1.89
PDX1P52945 SNORD84-203ENST00000584275 78 ntBASIC3.24□□□□□ -1.89
PDX1P52945 HMGN1P30-201ENST00000589286 268 ntBASIC3.24□□□□□ -1.89
PDX1P52945 AC007687.1-201ENST00000602704 304 ntBASIC3.24□□□□□ -1.89
PDX1P52945 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.24□□□□□ -1.89
PDX1P52945 AC012443.1-201ENST00000605605 231 ntBASIC3.24□□□□□ -1.89
PDX1P52945 RMST_8.1-201ENST00000610287 165 ntBASIC3.24□□□□□ -1.89
PDX1P52945 MIR6130-201ENST00000619419 109 ntBASIC3.24□□□□□ -1.89
PDX1P52945 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.24□□□□□ -1.89
PDX1P52945 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDX1P52945 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PDX1P52945 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PDX1P52945 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PDX1P52945 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PDX1P52945 AL138713.1-201ENST00000624026 2130 ntBASIC3.23□□□□□ -1.89
PDX1P52945 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.23□□□□□ -1.89
PDX1P52945 Y_RNA.201-201ENST00000364052 96 ntBASIC3.23□□□□□ -1.89
PDX1P52945 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDX1P52945 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDX1P52945 SNORA75-201ENST00000384158 137 ntBASIC3.23□□□□□ -1.89
PDX1P52945 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PDX1P52945 HMGN1P24-201ENST00000412282 298 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.23□□□□□ -1.89
PDX1P52945 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.23□□□□□ -1.89
PDX1P52945 AC006366.1-201ENST00000422002 759 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC004866.2-201ENST00000438285 481 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.23□□□□□ -1.89
PDX1P52945 PGBD4P3-201ENST00000440731 581 ntBASIC3.23□□□□□ -1.89
PDX1P52945 RPL26P6-201ENST00000440913 438 ntBASIC3.23□□□□□ -1.89
PDX1P52945 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.23□□□□□ -1.89
PDX1P52945 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.23□□□□□ -1.89
PDX1P52945 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.23□□□□□ -1.89
PDX1P52945 MTND1P9-201ENST00000453775 944 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AL136097.1-201ENST00000456945 913 ntBASIC3.23□□□□□ -1.89
PDX1P52945 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.23□□□□□ -1.89
PDX1P52945 AC004801.2-202ENST00000463559 283 ntBASIC3.23□□□□□ -1.89
PDX1P52945 RPL7P47-201ENST00000497299 556 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC135721.1-201ENST00000497954 479 ntBASIC3.23□□□□□ -1.89
PDX1P52945 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDX1P52945 AC110794.1-201ENST00000505816 425 ntBASIC3.23□□□□□ -1.89
PDX1P52945 HMGB3P15-201ENST00000507326 574 ntBASIC3.23□□□□□ -1.89
PDX1P52945 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.23□□□□□ -1.89
PDX1P52945 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.23□□□□□ -1.89
PDX1P52945 AC109464.2-201ENST00000510242 943 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC022483.1-201ENST00000514020 567 ntBASIC3.23□□□□□ -1.89
PDX1P52945 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.23□□□□□ -1.89
PDX1P52945 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.23□□□□□ -1.89
PDX1P52945 SNORA31.22-201ENST00000517204 135 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC103783.1-201ENST00000520506 373 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC022878.1-201ENST00000530684 149 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.23□□□□□ -1.89
PDX1P52945 SETP2-201ENST00000553886 926 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AL133153.1-201ENST00000557756 303 ntBASIC3.23□□□□□ -1.89
PDX1P52945 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.23□□□□□ -1.89
PDX1P52945 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.23□□□□□ -1.89
PDX1P52945 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.23□□□□□ -1.89
PDX1P52945 MIR4425-201ENST00000580572 84 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC009977.1-201ENST00000586015 570 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC006557.5-201ENST00000603126 811 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC010678.1-201ENST00000614118 713 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AL603758.1-201ENST00000618654 241 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC009509.4-201ENST00000619202 509 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC058791.1-201ENST00000608412 3198 ntBASIC3.23□□□□□ -1.89
PDX1P52945 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDX1P52945 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.23□□□□□ -1.89
PDX1P52945 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PDX1P52945 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.23□□□□□ -1.89
PDX1P52945 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PDX1P52945 PWAR6-201ENST00000552334 4618 ntBASIC3.23□□□□□ -1.89
PDX1P52945 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.23□□□□□ -1.89
PDX1P52945 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.22□□□□□ -1.89
PDX1P52945 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDX1P52945 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PDX1P52945 MIR30E-201ENST00000362104 92 ntBASIC3.22□□□□□ -1.89
PDX1P52945 RNU4-24P-201ENST00000364565 139 ntBASIC3.22□□□□□ -1.89
PDX1P52945 Y_RNA.359-201ENST00000365498 102 ntBASIC3.22□□□□□ -1.89
PDX1P52945 Y_RNA.436-201ENST00000384097 102 ntBASIC3.22□□□□□ -1.89
PDX1P52945 MIR184-201ENST00000384962 84 ntBASIC3.22□□□□□ -1.89
PDX1P52945 SNORA40.3-201ENST00000390964 122 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AL136372.1-201ENST00000403060 228 ntBASIC3.22□□□□□ -1.89
PDX1P52945 Y_RNA.598-201ENST00000410480 95 ntBASIC3.22□□□□□ -1.89
PDX1P52945 RNU6-516P-201ENST00000411381 104 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.22□□□□□ -1.89
PDX1P52945 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.22□□□□□ -1.89
PDX1P52945 PPP1R11P2-201ENST00000423543 382 ntBASIC3.22□□□□□ -1.89
PDX1P52945 BX890604.2-201ENST00000427883 474 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.22□□□□□ -1.89
PDX1P52945 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.22□□□□□ -1.89
PDX1P52945 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.22□□□□□ -1.89
PDX1P52945 RPL23AP31-201ENST00000456160 467 ntBASIC3.22□□□□□ -1.89
PDX1P52945 S100A11P2-201ENST00000467589 312 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms