Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SAR1AP2-201ENST00000392696 594 ntBASIC3.5□□□□□ -1.85
HADHAP40939 HSPE1P1-201ENST00000421494 318 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.5□□□□□ -1.85
HADHAP40939 HMGN2P31-201ENST00000432430 273 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.5□□□□□ -1.85
HADHAP40939 AC005094.1-201ENST00000440420 368 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.5□□□□□ -1.85
HADHAP40939 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.5□□□□□ -1.85
HADHAP40939 AC140076.1-201ENST00000449897 361 ntBASIC3.5□□□□□ -1.85
HADHAP40939 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.5□□□□□ -1.85
HADHAP40939 MTND3P7-201ENST00000474435 343 ntBASIC3.5□□□□□ -1.85
HADHAP40939 RPL30P14-201ENST00000482744 348 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AL049874.1-201ENST00000489560 388 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.5□□□□□ -1.85
HADHAP40939 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.5□□□□□ -1.85
HADHAP40939 MTND4LP22-201ENST00000508209 276 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AC010486.3-201ENST00000511602 785 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.5□□□□□ -1.85
HADHAP40939 ATP5F1P5-201ENST00000526403 760 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.5□□□□□ -1.85
HADHAP40939 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.5□□□□□ -1.85
HADHAP40939 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.5□□□□□ -1.85
HADHAP40939 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.5□□□□□ -1.85
HADHAP40939 ROCK1P1-201ENST00000573767 549 ntBASIC3.5□□□□□ -1.85
HADHAP40939 Z99497.2-201ENST00000603634 310 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AC008277.2-201ENST00000605196 797 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AC138749.5-201ENST00000611461 208 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.5□□□□□ -1.85
HADHAP40939 AC116165.2-201ENST00000616705 206 ntBASIC3.5□□□□□ -1.85
HADHAP40939 U4.6-201ENST00000621618 127 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AC009878.1-201ENST00000621819 340 ntBASIC3.5□□□□□ -1.85
HADHAP40939 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.5□□□□□ -1.85
HADHAP40939 MIR3974-201ENST00000637126 96 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AC010149.2-201ENST00000637608 315 ntBASIC3.5□□□□□ -1.85
HADHAP40939 AC022336.2-201ENST00000568966 2538 ntBASIC3.5□□□□□ -1.85
HADHAP40939 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HADHAP40939 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HADHAP40939 OR4G2P-202ENST00000641004 1759 ntBASIC3.49□□□□□ -1.85
HADHAP40939 RNA5SP72-201ENST00000364442 117 ntBASIC3.49□□□□□ -1.85
HADHAP40939 SNORA14A-201ENST00000364773 135 ntBASIC3.49□□□□□ -1.85
HADHAP40939 RNU4-91P-201ENST00000364778 135 ntBASIC3.49□□□□□ -1.85
HADHAP40939 MIR218-2-201ENST00000385006 110 ntBASIC3.49□□□□□ -1.85
HADHAP40939 MIR34B-201ENST00000385076 84 ntBASIC3.49□□□□□ -1.85
HADHAP40939 MT-TH-201ENST00000387441 69 ntBASIC3.49□□□□□ -1.85
HADHAP40939 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HADHAP40939 CCNG1P1-201ENST00000406783 885 ntBASIC3.49□□□□□ -1.85
HADHAP40939 Y_RNA.608-201ENST00000410647 95 ntBASIC3.49□□□□□ -1.85
HADHAP40939 RNA5SP38-201ENST00000410750 119 ntBASIC3.49□□□□□ -1.85
HADHAP40939 RNA5SP31-201ENST00000411144 127 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AL513331.1-201ENST00000411908 397 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AC093578.1-201ENST00000415219 368 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.49□□□□□ -1.85
HADHAP40939 TRIAP1P1-201ENST00000427062 225 ntBASIC3.49□□□□□ -1.85
HADHAP40939 RPL23AP82-202ENST00000427528 469 ntBASIC3.49□□□□□ -1.85
HADHAP40939 TIMM9P1-201ENST00000436122 256 ntBASIC3.49□□□□□ -1.85
HADHAP40939 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.49□□□□□ -1.85
HADHAP40939 ISCA1P2-201ENST00000438679 421 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AC093156.1-201ENST00000440382 670 ntBASIC3.49□□□□□ -1.85
HADHAP40939 MTND1P26-201ENST00000440488 538 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AL590365.1-201ENST00000450788 243 ntBASIC3.49□□□□□ -1.85
HADHAP40939 RPS4XP2-201ENST00000458402 793 ntBASIC3.49□□□□□ -1.85
HADHAP40939 CENPBD1P1-201ENST00000464061 469 ntBASIC3.49□□□□□ -1.85
HADHAP40939 RPS20P22-201ENST00000473700 357 ntBASIC3.49□□□□□ -1.85
HADHAP40939 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
HADHAP40939 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
HADHAP40939 PHBP14-201ENST00000512887 367 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.49□□□□□ -1.85
HADHAP40939 RNU6-1282P-201ENST00000516735 96 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AC107934.2-201ENST00000518653 310 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.49□□□□□ -1.85
HADHAP40939 AC022878.1-201ENST00000530684 149 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.49□□□□□ -1.85
HADHAP40939 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.49□□□□□ -1.85
HADHAP40939 AC093012.1-202ENST00000549403 582 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.49□□□□□ -1.85
HADHAP40939 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.49□□□□□ -1.85
HADHAP40939 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.49□□□□□ -1.85
HADHAP40939 MIR5697-201ENST00000578045 78 ntBASIC3.49□□□□□ -1.85
HADHAP40939 MIR3146-201ENST00000580367 79 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AL031775.1-201ENST00000607014 887 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AC245517.5-201ENST00000611529 162 ntBASIC3.49□□□□□ -1.85
HADHAP40939 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AC012314.7-201ENST00000619693 93 ntBASIC3.49□□□□□ -1.85
HADHAP40939 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
HADHAP40939 AC027309.3-201ENST00000623419 351 ntBASIC3.49□□□□□ -1.85
HADHAP40939 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.49□□□□□ -1.85
HADHAP40939 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HADHAP40939 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.49□□□□□ -1.85
HADHAP40939 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HADHAP40939 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.48□□□□□ -1.85
HADHAP40939 AL049781.1-201ENST00000623195 3585 ntBASIC3.48□□□□□ -1.85
HADHAP40939 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HADHAP40939 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.48□□□□□ -1.85
HADHAP40939 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.48□□□□□ -1.85
HADHAP40939 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HADHAP40939 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HADHAP40939 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HADHAP40939 AP002088.1-201ENST00000382740 395 ntBASIC3.48□□□□□ -1.85
HADHAP40939 RNU6-741P-201ENST00000383889 107 ntBASIC3.48□□□□□ -1.85
HADHAP40939 RN7SKP111-201ENST00000410349 271 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms