Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXD13P35453 AL354719.1-201ENST00000406535 843 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AL513331.1-201ENST00000411908 397 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXD13P35453 AC006366.1-201ENST00000422002 759 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 CBWD4P-201ENST00000445695 655 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 BMI1P1-201ENST00000445879 941 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 Z99127.3-201ENST00000448158 395 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC006539.3-201ENST00000454258 129 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC092798.1-201ENST00000458542 409 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXD13P35453 RPS4XP22-201ENST00000480755 780 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC010486.2-201ENST00000505572 483 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXD13P35453 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD13P35453 AC111000.2-201ENST00000507775 550 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXD13P35453 RNU6-201P-201ENST00000517100 61 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXD13P35453 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXD13P35453 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXD13P35453 MRPS36P5-201ENST00000551909 298 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC090888.1-201ENST00000561335 1141 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXD13P35453 AL356432.3-201ENST00000568952 465 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXD13P35453 AL606834.2-201ENST00000602954 668 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AL359999.1-201ENST00000604513 294 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC121334.2-201ENST00000605387 271 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 SNHG22-203ENST00000617833 660 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC012314.7-201ENST00000619693 93 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC097520.1-201ENST00000624435 385 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXD13P35453 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXD13P35453 OR5H6-203ENST00000642105 978 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXD13P35453 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD13P35453 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXD13P35453 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD13P35453 AC110774.1-201ENST00000623567 2018 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 SRP72P2-201ENST00000344851 1979 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HOXD13P35453 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD13P35453 AF228730.1-201ENST00000397972 663 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 RNU2-62P-201ENST00000410868 191 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 RNA5SP120-201ENST00000410900 112 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 RNA5SP107-201ENST00000411358 122 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXD13P35453 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXD13P35453 AL512844.2-201ENST00000433990 593 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AL049734.2-201ENST00000441066 616 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXD13P35453 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD13P35453 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXD13P35453 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXD13P35453 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXD13P35453 AC025881.1-201ENST00000518851 512 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AC106038.2-201ENST00000520706 568 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AC100870.1-201ENST00000522035 505 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD13P35453 AC123904.3-201ENST00000547218 814 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXD13P35453 AC037471.2-201ENST00000564941 598 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 ACTR3BP3-201ENST00000565577 979 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXD13P35453 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXD13P35453 KC877982.1-201ENST00000602313 470 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 HSPE1P7-201ENST00000604681 321 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AC008277.2-201ENST00000605196 797 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AC012360.2-201ENST00000609349 391 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AL157817.1-201ENST00000614264 790 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AC244100.1-202ENST00000621554 382 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 AC091903.1-201ENST00000624322 454 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXD13P35453 AC010149.2-201ENST00000637608 315 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD13P35453 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HOXD13P35453 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.51□□□□□ -1.85
HOXD13P35453 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD13P35453 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD13P35453 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXD13P35453 AL049641.1-201ENST00000441055 1948 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD13P35453 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXD13P35453 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXD13P35453 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD13P35453 Y_RNA.169-201ENST00000363745 96 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD13P35453 RNU6-533P-201ENST00000384144 107 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 MIR23B-201ENST00000384832 97 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 MIR7-3-201ENST00000384898 110 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 AC078974.1-201ENST00000411597 223 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXD13P35453 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXD13P35453 AC118469.1-201ENST00000442943 488 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 GDI2P2-201ENST00000445131 608 ntBASIC3.5□□□□□ -1.85
HOXD13P35453 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXD13P35453 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms