Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RPL31P41-201ENST00000477967 372 ntBASIC3.57□□□□□ -1.84
BDNFP23560 MTND2P14-201ENST00000482139 351 ntBASIC3.57□□□□□ -1.84
BDNFP23560 FCF1P3-201ENST00000496394 590 ntBASIC3.57□□□□□ -1.84
BDNFP23560 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.57□□□□□ -1.84
BDNFP23560 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.57□□□□□ -1.84
BDNFP23560 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.57□□□□□ -1.84
BDNFP23560 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.57□□□□□ -1.84
BDNFP23560 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.57□□□□□ -1.84
BDNFP23560 AL513302.2-201ENST00000562313 1842 ntBASIC3.57□□□□□ -1.84
BDNFP23560 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.57□□□□□ -1.84
BDNFP23560 AL162713.1-201ENST00000604480 262 ntBASIC3.57□□□□□ -1.84
BDNFP23560 AL161756.2-201ENST00000604597 246 ntBASIC3.57□□□□□ -1.84
BDNFP23560 AC079395.3-201ENST00000615161 484 ntBASIC3.57□□□□□ -1.84
BDNFP23560 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.57□□□□□ -1.84
BDNFP23560 AL607023.1-201ENST00000620045 248 ntBASIC3.57□□□□□ -1.84
BDNFP23560 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BDNFP23560 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BDNFP23560 AC006378.2-201ENST00000623178 2476 ntBASIC3.56□□□□□ -1.84
BDNFP23560 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BDNFP23560 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
BDNFP23560 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BDNFP23560 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BDNFP23560 Y_RNA.302-201ENST00000364997 102 ntBASIC3.56□□□□□ -1.84
BDNFP23560 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.56□□□□□ -1.84
BDNFP23560 Z80107.1-201ENST00000436830 412 ntBASIC3.56□□□□□ -1.84
BDNFP23560 AC097262.1-201ENST00000452559 548 ntBASIC3.56□□□□□ -1.84
BDNFP23560 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.56□□□□□ -1.84
BDNFP23560 AC126182.1-201ENST00000478134 357 ntBASIC3.56□□□□□ -1.84
BDNFP23560 RPL21P13-201ENST00000488305 481 ntBASIC3.56□□□□□ -1.84
BDNFP23560 AC055855.1-201ENST00000489563 579 ntBASIC3.56□□□□□ -1.84
BDNFP23560 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.56□□□□□ -1.84
BDNFP23560 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
BDNFP23560 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.56□□□□□ -1.84
BDNFP23560 RN7SKP258-201ENST00000517151 304 ntBASIC3.56□□□□□ -1.84
BDNFP23560 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.56□□□□□ -1.84
BDNFP23560 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.56□□□□□ -1.84
BDNFP23560 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BDNFP23560 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.56□□□□□ -1.84
BDNFP23560 DEFB108A-201ENST00000530110 222 ntBASIC3.56□□□□□ -1.84
BDNFP23560 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.56□□□□□ -1.84
BDNFP23560 TRAV37-201ENST00000553906 342 ntBASIC3.56□□□□□ -1.84
BDNFP23560 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.56□□□□□ -1.84
BDNFP23560 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.56□□□□□ -1.84
BDNFP23560 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.56□□□□□ -1.84
BDNFP23560 AC110801.1-201ENST00000623590 212 ntBASIC3.56□□□□□ -1.84
BDNFP23560 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.56□□□□□ -1.84
BDNFP23560 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
BDNFP23560 AC073346.2-201ENST00000624724 2058 ntBASIC3.56□□□□□ -1.84
BDNFP23560 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.56□□□□□ -1.84
BDNFP23560 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BDNFP23560 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
BDNFP23560 RNU6-433P-201ENST00000363216 104 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AL031121.1-201ENST00000406553 254 ntBASIC3.55□□□□□ -1.84
BDNFP23560 RNU2-25P-201ENST00000411041 191 ntBASIC3.55□□□□□ -1.84
BDNFP23560 RNA5SP107-201ENST00000411358 122 ntBASIC3.55□□□□□ -1.84
BDNFP23560 NDUFS5P4-201ENST00000412983 318 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AC013410.2-201ENST00000422627 201 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.55□□□□□ -1.84
BDNFP23560 AC009414.1-201ENST00000427200 443 ntBASIC3.55□□□□□ -1.84
BDNFP23560 OR2B8P-201ENST00000432841 938 ntBASIC3.55□□□□□ -1.84
BDNFP23560 SNRPEP9-201ENST00000436794 238 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AC005094.1-201ENST00000440420 368 ntBASIC3.55□□□□□ -1.84
BDNFP23560 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.55□□□□□ -1.84
BDNFP23560 AC021146.5-201ENST00000503544 545 ntBASIC3.55□□□□□ -1.84
BDNFP23560 APOOP4-201ENST00000513530 597 ntBASIC3.55□□□□□ -1.84
BDNFP23560 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.55□□□□□ -1.84
BDNFP23560 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.55□□□□□ -1.84
BDNFP23560 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.55□□□□□ -1.84
BDNFP23560 AC005476.1-201ENST00000554427 397 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.55□□□□□ -1.84
BDNFP23560 AC037471.2-201ENST00000564941 598 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AC002400.1-201ENST00000569310 726 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AL137843.1-201ENST00000605078 385 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AC107294.1-201ENST00000609524 467 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AC092106.3-201ENST00000611308 722 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AL592295.2-201ENST00000612578 206 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AL442067.2-201ENST00000614033 363 ntBASIC3.55□□□□□ -1.84
BDNFP23560 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.55□□□□□ -1.84
BDNFP23560 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.55□□□□□ -1.84
BDNFP23560 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.55□□□□□ -1.84
BDNFP23560 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.55□□□□□ -1.84
BDNFP23560 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BDNFP23560 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
BDNFP23560 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BDNFP23560 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BDNFP23560 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
BDNFP23560 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
BDNFP23560 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.54□□□□□ -1.84
BDNFP23560 RNU6-1180P-201ENST00000364935 107 ntBASIC3.54□□□□□ -1.84
BDNFP23560 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BDNFP23560 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
BDNFP23560 MIR627-201ENST00000384979 97 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.54□□□□□ -1.84
BDNFP23560 FO393413.1-201ENST00000402892 195 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AL359634.1-202ENST00000404721 284 ntBASIC3.54□□□□□ -1.84
BDNFP23560 VPS26BP1-201ENST00000417155 755 ntBASIC3.54□□□□□ -1.84
BDNFP23560 BTF3L4P3-201ENST00000418879 476 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.54□□□□□ -1.84
BDNFP23560 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.54□□□□□ -1.84
BDNFP23560 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms