Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC103988.1-201ENST00000566382 2177 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 RNU5E-8P-201ENST00000363502 116 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 RNU6-7-201ENST00000364784 107 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 RNU6-8-201ENST00000365467 107 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 RNU6-1207P-201ENST00000384343 107 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 RNU6-636P-201ENST00000384598 107 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 RNU6-1197P-201ENST00000391183 107 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 RPS3AP26-201ENST00000398259 784 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 CCDC58P2-201ENST00000417131 366 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 RPL7P10-201ENST00000417407 739 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC013410.2-201ENST00000422627 201 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 PPP1R11P2-201ENST00000423543 382 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 USP9YP24-201ENST00000434374 697 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 CR769767.1-201ENST00000436337 346 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 COX7BP2-201ENST00000437976 242 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC105272.1-201ENST00000438604 198 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 USP9YP17-201ENST00000444617 696 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC234775.1-201ENST00000454247 670 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AL031183.1-201ENST00000457667 207 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 SNORD121B-201ENST00000458838 81 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC010587.2-201ENST00000511727 448 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 RNA5SP402-201ENST00000517148 110 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AL132857.1-201ENST00000555180 708 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC011260.1-201ENST00000578420 472 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AL353997.4-201ENST00000586196 166 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 MTCO2P2-201ENST00000591258 225 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 TPMTP1-201ENST00000592307 737 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 VN1R90P-201ENST00000595717 726 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC104237.2-201ENST00000612456 443 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC027309.3-201ENST00000623419 351 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 AC011477.1-204ENST00000623416 1325 ntBASIC2.32□□□□□ -2.04
HLA-DPB1P04440 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DPB1P04440 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC008568.2-201ENST00000623862 2313 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL672167.1-206ENST00000356293 943 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 U8.8-201ENST00000365399 135 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 CD24P4-201ENST00000382840 243 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 SNORA1.3-201ENST00000384676 136 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 USP9YP33-201ENST00000412220 421 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 RPLP0P7-201ENST00000416050 667 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 ELOCP9-201ENST00000418624 239 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 TMEM167AP1-201ENST00000423409 219 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC109583.1-201ENST00000432156 268 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 USP9YP35-201ENST00000435696 412 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL117351.1-201ENST00000438864 766 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL831737.1-201ENST00000441288 271 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC011816.1-201ENST00000441346 546 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL121871.1-201ENST00000443413 436 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 SNRPGP6-201ENST00000451124 220 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 CACYBPP2-201ENST00000453625 678 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC010099.1-201ENST00000455434 375 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL109741.2-201ENST00000455561 343 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 HSPE1P6-201ENST00000479457 291 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL049874.1-201ENST00000489560 388 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC147055.4-201ENST00000504399 745 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC104090.1-201ENST00000506341 1171 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL359273.1-201ENST00000510918 627 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 TTC39CP1-201ENST00000512513 755 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 SNORA31.21-201ENST00000517180 77 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC103783.1-201ENST00000520506 373 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms