Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.88□□□□□ -1.95
MBD3O95983 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.88□□□□□ -1.95
MBD3O95983 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MBD3O95983 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
MBD3O95983 AC022336.2-201ENST00000568966 2538 ntBASIC2.87□□□□□ -1.95
MBD3O95983 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.87□□□□□ -1.95
MBD3O95983 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.87□□□□□ -1.95
MBD3O95983 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
MBD3O95983 Y_RNA.192-201ENST00000363977 102 ntBASIC2.87□□□□□ -1.95
MBD3O95983 SNORD116.1-201ENST00000365628 92 ntBASIC2.87□□□□□ -1.95
MBD3O95983 RNU6-754P-201ENST00000391166 107 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.87□□□□□ -1.95
MBD3O95983 AF274854.1-201ENST00000413236 615 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3O95983 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.87□□□□□ -1.95
MBD3O95983 AC018630.2-202ENST00000422992 927 ntBASIC2.87□□□□□ -1.95
MBD3O95983 ZYG11AP1-201ENST00000430329 837 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3O95983 AC087499.2-201ENST00000432861 149 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AC098826.1-201ENST00000433943 471 ntBASIC2.87□□□□□ -1.95
MBD3O95983 USP9YP24-201ENST00000434374 697 ntBASIC2.87□□□□□ -1.95
MBD3O95983 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3O95983 USP9YP17-201ENST00000444617 696 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3O95983 AC009961.3-201ENST00000449832 765 ntBASIC2.87□□□□□ -1.95
MBD3O95983 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3O95983 AC092798.1-201ENST00000458542 409 ntBASIC2.87□□□□□ -1.95
MBD3O95983 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3O95983 AC026427.2-201ENST00000506228 536 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AC116353.3-201ENST00000511215 249 ntBASIC2.87□□□□□ -1.95
MBD3O95983 RNA5SP216-201ENST00000516111 123 ntBASIC2.87□□□□□ -1.95
MBD3O95983 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3O95983 AL132857.1-201ENST00000555180 708 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.87□□□□□ -1.95
MBD3O95983 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.87□□□□□ -1.95
MBD3O95983 AC004067.1-201ENST00000608733 700 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AC013476.2-201ENST00000614456 459 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AC009268.2-201ENST00000621925 457 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.87□□□□□ -1.95
MBD3O95983 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MBD3O95983 AC012321.1-201ENST00000561622 1588 ntBASIC2.87□□□□□ -1.95
MBD3O95983 AP000526.1-201ENST00000603308 1388 ntBASIC2.87□□□□□ -1.95
MBD3O95983 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MBD3O95983 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MBD3O95983 RNA5SP139-201ENST00000364340 117 ntBASIC2.86□□□□□ -1.95
MBD3O95983 Y_RNA.548-201ENST00000384656 105 ntBASIC2.86□□□□□ -1.95
MBD3O95983 SNORA80E-201ENST00000384744 137 ntBASIC2.86□□□□□ -1.95
MBD3O95983 RNVU1-14-201ENST00000384770 164 ntBASIC2.86□□□□□ -1.95
MBD3O95983 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
MBD3O95983 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
MBD3O95983 UBA52P6-201ENST00000399822 382 ntBASIC2.86□□□□□ -1.95
MBD3O95983 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.86□□□□□ -1.95
MBD3O95983 AL354692.1-201ENST00000423044 315 ntBASIC2.86□□□□□ -1.95
MBD3O95983 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.86□□□□□ -1.95
MBD3O95983 AL512649.1-201ENST00000428997 581 ntBASIC2.86□□□□□ -1.95
MBD3O95983 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.86□□□□□ -1.95
MBD3O95983 SDR42E1P3-201ENST00000438345 502 ntBASIC2.86□□□□□ -1.95
MBD3O95983 UBBP3-201ENST00000445497 241 ntBASIC2.86□□□□□ -1.95
MBD3O95983 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.86□□□□□ -1.95
MBD3O95983 AC010099.1-201ENST00000455434 375 ntBASIC2.86□□□□□ -1.95
MBD3O95983 AC005410.1-202ENST00000460347 485 ntBASIC2.86□□□□□ -1.95
MBD3O95983 RPL30P9-201ENST00000465586 330 ntBASIC2.86□□□□□ -1.95
MBD3O95983 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.86□□□□□ -1.95
MBD3O95983 AC021382.1-201ENST00000483523 359 ntBASIC2.86□□□□□ -1.95
MBD3O95983 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.86□□□□□ -1.95
MBD3O95983 AC125611.2-201ENST00000551907 647 ntBASIC2.86□□□□□ -1.95
MBD3O95983 NBEAP1-201ENST00000554452 979 ntBASIC2.86□□□□□ -1.95
MBD3O95983 RPL23AP84-201ENST00000571193 464 ntBASIC2.86□□□□□ -1.95
MBD3O95983 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.86□□□□□ -1.95
MBD3O95983 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.86□□□□□ -1.95
MBD3O95983 AC245389.1-201ENST00000605141 529 ntBASIC2.86□□□□□ -1.95
MBD3O95983 AL139022.2-201ENST00000606934 443 ntBASIC2.86□□□□□ -1.95
MBD3O95983 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.86□□□□□ -1.95
MBD3O95983 AC131235.4-201ENST00000609288 620 ntBASIC2.86□□□□□ -1.95
MBD3O95983 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.86□□□□□ -1.95
MBD3O95983 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.86□□□□□ -1.95
MBD3O95983 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.86□□□□□ -1.95
MBD3O95983 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
MBD3O95983 AC099654.7-201ENST00000635788 2127 ntBASIC2.86□□□□□ -1.95
MBD3O95983 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.85□□□□□ -1.95
MBD3O95983 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.85□□□□□ -1.95
MBD3O95983 RNU6-97P-201ENST00000363387 104 ntBASIC2.85□□□□□ -1.95
MBD3O95983 RNU5E-8P-201ENST00000363502 116 ntBASIC2.85□□□□□ -1.95
MBD3O95983 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.85□□□□□ -1.95
MBD3O95983 RNU6-1078P-201ENST00000364522 103 ntBASIC2.85□□□□□ -1.95
MBD3O95983 RNU6-637P-201ENST00000384050 107 ntBASIC2.85□□□□□ -1.95
MBD3O95983 SNORA41-201ENST00000384675 132 ntBASIC2.85□□□□□ -1.95
MBD3O95983 MIR23B-201ENST00000384832 97 ntBASIC2.85□□□□□ -1.95
MBD3O95983 MIR514A1-201ENST00000385133 98 ntBASIC2.85□□□□□ -1.95
MBD3O95983 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.85□□□□□ -1.95
MBD3O95983 AC106883.1-201ENST00000418805 562 ntBASIC2.85□□□□□ -1.95
MBD3O95983 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.85□□□□□ -1.95
MBD3O95983 RPL35AP12-201ENST00000425362 338 ntBASIC2.85□□□□□ -1.95
MBD3O95983 AC084290.1-201ENST00000434995 374 ntBASIC2.85□□□□□ -1.95
MBD3O95983 Z96811.1-201ENST00000445880 108 ntBASIC2.85□□□□□ -1.95
MBD3O95983 MTND1P31-201ENST00000449206 961 ntBASIC2.85□□□□□ -1.95
MBD3O95983 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.85□□□□□ -1.95
MBD3O95983 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.85□□□□□ -1.95
MBD3O95983 AC073901.1-201ENST00000462471 408 ntBASIC2.85□□□□□ -1.95
MBD3O95983 AC112673.1-201ENST00000513168 575 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms