Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CNOT4O95628 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CNOT4O95628 BDP1P-201ENST00000582658 1990 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CNOT4O95628 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CNOT4O95628 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CNOT4O95628 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CNOT4O95628 Y_RNA.212-201ENST00000364177 102 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 SNORD115-7-201ENST00000365306 82 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 Y_RNA.482-201ENST00000384377 111 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 SNORD3H-201ENST00000384486 214 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CNOT4O95628 AL139397.2-201ENST00000404529 772 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 RNU2-71P-201ENST00000411395 189 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 POLHP1-201ENST00000411806 470 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 RPS12P24-201ENST00000412619 387 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.31□□□□□ -1.72
CNOT4O95628 AL137014.1-201ENST00000420490 1226 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.31□□□□□ -1.72
CNOT4O95628 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.31□□□□□ -1.72
CNOT4O95628 VDAC1P3-201ENST00000434069 851 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.31□□□□□ -1.72
CNOT4O95628 RPL23AP55-201ENST00000498163 452 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CNOT4O95628 MTCO2P24-201ENST00000515611 426 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 RNU6-976P-201ENST00000516086 111 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.31□□□□□ -1.72
CNOT4O95628 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.31□□□□□ -1.72
CNOT4O95628 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.31□□□□□ -1.72
CNOT4O95628 SNORA74C-1-201ENST00000580726 201 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 MIR4680-201ENST00000580906 66 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 AC024619.4-201ENST00000580924 316 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 AC069061.3-201ENST00000582254 823 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 MIR3672-201ENST00000584290 82 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 RN7SL435P-201ENST00000584418 282 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.31□□□□□ -1.72
CNOT4O95628 AC083806.3-201ENST00000614016 455 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 MIR6758-201ENST00000620653 63 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 MIR7703-201ENST00000620784 77 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 AC007792.1-201ENST00000623023 402 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.31□□□□□ -1.72
CNOT4O95628 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.31□□□□□ -1.72
CNOT4O95628 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CNOT4O95628 USP8P1-201ENST00000494673 3183 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CNOT4O95628 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.31□□□□□ -1.72
CNOT4O95628 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CNOT4O95628 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CNOT4O95628 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.31□□□□□ -1.72
CNOT4O95628 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.31□□□□□ -1.72
CNOT4O95628 AC008725.1-201ENST00000605123 2263 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.3□□□□□ -1.72
CNOT4O95628 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CNOT4O95628 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNOT4O95628 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CNOT4O95628 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CNOT4O95628 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CNOT4O95628 RNU6-1287P-201ENST00000362914 107 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 Y_RNA.158-201ENST00000363651 101 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 RNU6-1318P-201ENST00000365389 103 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 RNU5E-6P-201ENST00000365574 115 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 RNU6-601P-201ENST00000384540 107 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 RNU6-1060P-201ENST00000384664 107 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 EIF4E2P1-201ENST00000393781 255 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 MIR548F4-201ENST00000408515 105 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 RNU6-985P-201ENST00000410182 104 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.3□□□□□ -1.72
CNOT4O95628 BX510359.2-201ENST00000417920 305 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 NUP35P1-201ENST00000422734 947 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 SKA2P1-201ENST00000425592 390 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.3□□□□□ -1.72
CNOT4O95628 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.3□□□□□ -1.72
CNOT4O95628 AL035666.1-201ENST00000446195 348 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 OR1H1P-201ENST00000448731 937 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 MTND1P17-201ENST00000448961 204 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.3□□□□□ -1.72
CNOT4O95628 RPL23AP56-201ENST00000460778 453 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.3□□□□□ -1.72
CNOT4O95628 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.3□□□□□ -1.72
CNOT4O95628 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.3□□□□□ -1.72
CNOT4O95628 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CNOT4O95628 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.3□□□□□ -1.72
CNOT4O95628 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.3□□□□□ -1.72
CNOT4O95628 RNA5SP73-201ENST00000516744 108 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 RNU6-794P-201ENST00000517261 64 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.3□□□□□ -1.72
CNOT4O95628 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.3□□□□□ -1.72
CNOT4O95628 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.3□□□□□ -1.72
CNOT4O95628 AL133271.1-201ENST00000538229 291 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
CNOT4O95628 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
CNOT4O95628 SETP7-201ENST00000552169 453 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.3□□□□□ -1.72
CNOT4O95628 AC138761.3-201ENST00000579993 334 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AC023043.2-201ENST00000589678 1026 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AL355598.1-201ENST00000604169 202 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AL121932.1-201ENST00000605542 214 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 AC083809.1-201ENST00000615051 472 ntBASIC4.3□□□□□ -1.72
CNOT4O95628 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms