Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-2O95096 TAAR7P-201ENST00000436141 242 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.35□□□□□ -1.87
NKX2-2O95096 MTATP6P30-201ENST00000443540 664 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-2O95096 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-2O95096 AC004924.1-201ENST00000480160 781 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.35□□□□□ -1.87
NKX2-2O95096 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.35□□□□□ -1.87
NKX2-2O95096 AC091133.4-201ENST00000511142 308 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 RNU6-1256P-201ENST00000516539 103 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 RN7SKP258-201ENST00000517151 304 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-2O95096 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX2-2O95096 AC078795.2-201ENST00000602835 1252 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 AC013553.2-201ENST00000604244 589 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 AC006077.1-201ENST00000604746 343 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX2-2O95096 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.35□□□□□ -1.87
NKX2-2O95096 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX2-2O95096 AL137003.2-201ENST00000606924 2538 ntBASIC3.35□□□□□ -1.87
NKX2-2O95096 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.35□□□□□ -1.87
NKX2-2O95096 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX2-2O95096 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NKX2-2O95096 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-2O95096 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-2O95096 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
NKX2-2O95096 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
NKX2-2O95096 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
NKX2-2O95096 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-2O95096 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-2O95096 RNY1P12-201ENST00000364251 105 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 RNA5SP51-201ENST00000364750 119 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 RNU6-169P-201ENST00000365336 107 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-2O95096 ATP5A1P2-201ENST00000412323 255 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 Z85995.1-201ENST00000415547 335 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 CYP4F29P-201ENST00000420685 446 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 RAC1P6-201ENST00000423911 575 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-2O95096 OR2AS1P-201ENST00000427827 319 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.34□□□□□ -1.87
NKX2-2O95096 FCF1P1-201ENST00000432690 571 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 RPL7P28-201ENST00000437739 740 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-2O95096 SNRPGP6-201ENST00000451124 220 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 ANP32BP2-201ENST00000454525 545 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX2-2O95096 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.34□□□□□ -1.87
NKX2-2O95096 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.34□□□□□ -1.87
NKX2-2O95096 RPS20P22-201ENST00000473700 357 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 RN7SL432P-201ENST00000484057 298 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC105252.1-201ENST00000503089 286 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-2O95096 RNU7-51P-201ENST00000516560 62 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-2O95096 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-2O95096 AP003392.2-201ENST00000527269 208 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX2-2O95096 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-2O95096 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.34□□□□□ -1.87
NKX2-2O95096 AC009063.1-201ENST00000563342 702 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-2O95096 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.34□□□□□ -1.87
NKX2-2O95096 AL391840.1-201ENST00000571144 367 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX2-2O95096 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX2-2O95096 AL670379.6-201ENST00000603753 252 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AL670379.11-201ENST00000604059 253 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC008162.1-201ENST00000604718 254 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AL670379.1-201ENST00000604752 252 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AL670379.5-201ENST00000605253 252 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AL670379.12-201ENST00000605291 253 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AL670379.8-201ENST00000605353 252 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AL670379.7-201ENST00000605823 252 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AP002360.4-201ENST00000606980 481 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AL161734.1-201ENST00000609720 557 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AL731566.2-201ENST00000618971 317 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC136475.10-201ENST00000620253 385 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 AC244100.1-202ENST00000621554 382 ntBASIC3.34□□□□□ -1.87
NKX2-2O95096 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX2-2O95096 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-2O95096 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NKX2-2O95096 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NKX2-2O95096 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
NKX2-2O95096 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.34□□□□□ -1.88
NKX2-2O95096 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-2O95096 AP001148.1-201ENST00000624124 2359 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AC007656.2-201ENST00000624902 4547 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-2O95096 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NKX2-2O95096 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NKX2-2O95096 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
NKX2-2O95096 RNU5A-6P-201ENST00000384136 116 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 RNU6-1197P-201ENST00000391183 107 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AL590704.1-201ENST00000402856 794 ntBASIC3.33□□□□□ -1.88
NKX2-2O95096 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.33□□□□□ -1.88
NKX2-2O95096 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.33□□□□□ -1.88
NKX2-2O95096 AC002075.2-201ENST00000425207 252 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms