Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF40O75150 SNORA25.1-201ENST00000362326 128 ntBASIC6.06□□□□□ -1.44
RNF40O75150 RNA5SP46-201ENST00000362370 120 ntBASIC6.06□□□□□ -1.44
RNF40O75150 Y_RNA.218-201ENST00000364218 104 ntBASIC6.06□□□□□ -1.44
RNF40O75150 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RNF40O75150 RNU2-22P-201ENST00000411266 212 ntBASIC6.06□□□□□ -1.44
RNF40O75150 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF40O75150 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF40O75150 AL117339.3-201ENST00000418733 162 ntBASIC6.06□□□□□ -1.44
RNF40O75150 AL355433.1-201ENST00000422804 300 ntBASIC6.06□□□□□ -1.44
RNF40O75150 OOSP1P1-201ENST00000423265 274 ntBASIC6.06□□□□□ -1.44
RNF40O75150 TOMM20P4-201ENST00000427861 435 ntBASIC6.06□□□□□ -1.44
RNF40O75150 CFL1P1-202ENST00000432948 411 ntBASIC6.06□□□□□ -1.44
RNF40O75150 USP9YP7-201ENST00000436723 430 ntBASIC6.06□□□□□ -1.44
RNF40O75150 CYCSP12-201ENST00000437729 300 ntBASIC6.06□□□□□ -1.44
RNF40O75150 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF40O75150 USP9YP32-201ENST00000452432 430 ntBASIC6.06□□□□□ -1.44
RNF40O75150 SDC4P-201ENST00000453285 601 ntBASIC6.06□□□□□ -1.44
RNF40O75150 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF40O75150 RPS26P21-201ENST00000475397 348 ntBASIC6.06□□□□□ -1.44
RNF40O75150 AP001025.1-201ENST00000486139 332 ntBASIC6.06□□□□□ -1.44
RNF40O75150 AC091959.1-201ENST00000495857 238 ntBASIC6.06□□□□□ -1.44
RNF40O75150 Y_RNA.706-201ENST00000516933 99 ntBASIC6.06□□□□□ -1.44
RNF40O75150 Y_RNA.719-201ENST00000517156 106 ntBASIC6.06□□□□□ -1.44
RNF40O75150 IGKV2-18-201ENST00000522607 343 ntBASIC6.06□□□□□ -1.44
RNF40O75150 HMGN2P36-201ENST00000529541 409 ntBASIC6.06□□□□□ -1.44
RNF40O75150 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF40O75150 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF40O75150 AC112693.2-201ENST00000556538 232 ntBASIC6.06□□□□□ -1.44
RNF40O75150 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF40O75150 AC090617.3-201ENST00000573670 475 ntBASIC6.06□□□□□ -1.44
RNF40O75150 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.06□□□□□ -1.44
RNF40O75150 B3GNTL1P2-201ENST00000603673 288 ntBASIC6.06□□□□□ -1.44
RNF40O75150 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.06□□□□□ -1.44
RNF40O75150 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF40O75150 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RNF40O75150 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF40O75150 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF40O75150 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF40O75150 AL731532.2-201ENST00000623542 1953 ntBASIC6.06□□□□□ -1.44
RNF40O75150 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF40O75150 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF40O75150 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF40O75150 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF40O75150 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RNF40O75150 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF40O75150 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF40O75150 U3.7-201ENST00000363668 216 ntBASIC6.05□□□□□ -1.44
RNF40O75150 RNU6-1325P-201ENST00000364905 105 ntBASIC6.05□□□□□ -1.44
RNF40O75150 RNU6-1289P-201ENST00000384431 106 ntBASIC6.05□□□□□ -1.44
RNF40O75150 MIR135A2-201ENST00000384854 100 ntBASIC6.05□□□□□ -1.44
RNF40O75150 MIR569-201ENST00000385228 96 ntBASIC6.05□□□□□ -1.44
RNF40O75150 SNORD56-201ENST00000413522 71 ntBASIC6.05□□□□□ -1.44
RNF40O75150 AC092447.6-201ENST00000414578 210 ntBASIC6.05□□□□□ -1.44
RNF40O75150 AL133482.1-201ENST00000415988 498 ntBASIC6.05□□□□□ -1.44
RNF40O75150 PPP1R11P2-201ENST00000423543 382 ntBASIC6.05□□□□□ -1.44
RNF40O75150 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.05□□□□□ -1.44
RNF40O75150 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF40O75150 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF40O75150 EEF1A1P1-201ENST00000447052 739 ntBASIC6.05□□□□□ -1.44
RNF40O75150 RPL7L1P1-201ENST00000448259 785 ntBASIC6.05□□□□□ -1.44
RNF40O75150 AC010409.1-201ENST00000487382 476 ntBASIC6.05□□□□□ -1.44
RNF40O75150 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF40O75150 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF40O75150 MIR892C-201ENST00000516410 77 ntBASIC6.05□□□□□ -1.44
RNF40O75150 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF40O75150 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.05□□□□□ -1.44
RNF40O75150 AC008785.1-201ENST00000624475 456 ntBASIC6.05□□□□□ -1.44
RNF40O75150 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF40O75150 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RNF40O75150 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF40O75150 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF40O75150 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF40O75150 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RNF40O75150 SNORA64.1-201ENST00000362600 132 ntBASIC6.04□□□□□ -1.44
RNF40O75150 RNU6-989P-201ENST00000362756 107 ntBASIC6.04□□□□□ -1.44
RNF40O75150 Y_RNA.127-201ENST00000363386 109 ntBASIC6.04□□□□□ -1.44
RNF40O75150 RNU6-1179P-201ENST00000384667 107 ntBASIC6.04□□□□□ -1.44
RNF40O75150 RNU4-30P-201ENST00000410245 143 ntBASIC6.04□□□□□ -1.44
RNF40O75150 AL662874.1-201ENST00000426065 230 ntBASIC6.04□□□□□ -1.44
RNF40O75150 AC090774.1-201ENST00000435925 246 ntBASIC6.04□□□□□ -1.44
RNF40O75150 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF40O75150 AL163193.1-201ENST00000444895 788 ntBASIC6.04□□□□□ -1.44
RNF40O75150 EEF1B2P6-201ENST00000445713 673 ntBASIC6.04□□□□□ -1.44
RNF40O75150 AC007395.1-201ENST00000451333 677 ntBASIC6.04□□□□□ -1.44
RNF40O75150 AL160314.1-201ENST00000490836 438 ntBASIC6.04□□□□□ -1.44
RNF40O75150 RFPL4AP5-201ENST00000514977 504 ntBASIC6.04□□□□□ -1.44
RNF40O75150 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.04□□□□□ -1.44
RNF40O75150 SNORA72.7-201ENST00000516349 94 ntBASIC6.04□□□□□ -1.44
RNF40O75150 SNORD116-25-201ENST00000516517 92 ntBASIC6.04□□□□□ -1.44
RNF40O75150 OR4H12P-201ENST00000556269 907 ntBASIC6.04□□□□□ -1.44
RNF40O75150 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF40O75150 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF40O75150 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms