Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 MAPK10-372ENST00000641954 3413 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 Y_RNA.409-201ENST00000383990 98 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 RNU6-637P-201ENST00000384050 107 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 USP9YP6-201ENST00000413550 854 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 MTATP6P18-201ENST00000417994 673 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 RPS15AP12-201ENST00000419498 388 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 OR4K11P-201ENST00000431829 904 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 RPL35AP22-201ENST00000436855 335 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 MTCO3P18-201ENST00000440206 761 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC006011.1-201ENST00000442758 349 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC016696.1-201ENST00000446949 318 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 RPS29P25-201ENST00000481709 171 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 RN7SL271P-201ENST00000487601 295 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC110792.1-201ENST00000491826 472 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 FTH1P9-201ENST00000513251 355 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC103783.1-201ENST00000520506 373 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC104383.1-201ENST00000530297 370 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AL133271.1-201ENST00000538229 291 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC025678.1-201ENST00000567861 338 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 OR4K8P-201ENST00000578842 1048 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 MIR4293-201ENST00000584305 78 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 SRGNP1-201ENST00000603392 451 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC012507.3-201ENST00000603556 477 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 TUG1_1.1-201ENST00000610654 145 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AL355073.2-201ENST00000612106 557 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC002553.4-201ENST00000616896 331 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AL353748.2-201ENST00000622148 471 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC139792.3-201ENST00000623525 224 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC138649.5-201ENST00000637456 137 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 RPS4XP5-202ENST00000449995 1334 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 AC066616.2-201ENST00000559334 1481 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 RNU6-1085P-201ENST00000363576 107 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 U3.11-201ENST00000364476 212 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 RNU6-74P-201ENST00000384235 107 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 RNY3P14-201ENST00000384309 102 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 Y_RNA.481-201ENST00000384373 102 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 FGF7P8-201ENST00000402994 292 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 MIR1251-201ENST00000408552 70 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 RNU6-516P-201ENST00000411381 104 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 ELOCP4-201ENST00000420090 333 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC244098.2-201ENST00000422068 99 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC011742.1-201ENST00000431448 434 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 GPR143P-201ENST00000434155 205 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AF228730.2-201ENST00000438784 848 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC005094.1-201ENST00000440420 368 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 HMGN2P21-201ENST00000447764 270 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC069499.1-201ENST00000489433 509 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 SCARNA24.1-201ENST00000516465 137 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 RNU6-798P-201ENST00000516912 103 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 SNORA70.24-201ENST00000517233 118 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 DEFB108D-201ENST00000527787 222 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC109635.3-201ENST00000529536 185 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC120057.2-201ENST00000571520 271 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC090616.5-202ENST00000582111 297 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC025449.1-201ENST00000603896 529 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AL391261.4-201ENST00000616012 481 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 U7.8-201ENST00000619968 63 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC012442.3-202ENST00000636742 206 ntBASIC3.85□□□□□ -1.79
VPS4AQ9UN37 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS4AQ9UN37 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms