Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 SNORA36C-201ENST00000384289 132 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 RNU6-851P-201ENST00000384565 107 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 MTND4P13-201ENST00000402078 1023 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 NDUFB4P4-201ENST00000404822 243 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 RNU6-516P-201ENST00000411381 104 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 MRPL50P2-201ENST00000416821 482 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC091390.3-201ENST00000426478 338 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC092573.2-201ENST00000434546 243 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC093156.1-201ENST00000440382 670 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AL135938.1-201ENST00000443141 297 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AL591719.1-201ENST00000444669 744 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 RPS3AP14-201ENST00000483907 780 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AL049874.1-201ENST00000489560 388 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC106872.3-201ENST00000495104 446 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC106791.2-201ENST00000604680 391 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC013244.3-201ENST00000605614 388 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AC024560.3-201ENST00000608482 349 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 AL137790.1-201ENST00000634283 177 ntBASIC2.92□□□□□ -1.94
LHX3Q9UBR4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LHX3Q9UBR4 ZNF826P-207ENST00000622273 1910 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 RNA5SP88-201ENST00000365560 109 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 RNU6-754P-201ENST00000391166 107 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 RSL24D1P4-201ENST00000400938 484 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AL354719.1-201ENST00000406535 843 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 RN7SKP58-201ENST00000411010 305 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 HIGD1AP15-201ENST00000416198 280 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AL022400.1-201ENST00000423946 935 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC234781.2-201ENST00000426370 994 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 RPL7L1P10-201ENST00000427790 463 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC107083.1-201ENST00000439643 279 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 NIPA2P5-201ENST00000452282 464 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 MTND2P24-201ENST00000453434 806 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AP002884.2-201ENST00000471647 395 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC022447.3-201ENST00000506865 495 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 POU5F1P7-201ENST00000508759 541 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 HSPE1P23-201ENST00000509838 286 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 RNU6-798P-201ENST00000516912 103 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 CASP1P1-201ENST00000526345 212 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC023538.1-201ENST00000534576 736 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC022022.2-201ENST00000602989 360 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC024153.1-201ENST00000603103 365 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AL357094.1-201ENST00000603845 844 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC079395.3-201ENST00000615161 484 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AL603758.1-201ENST00000618654 241 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC027309.3-201ENST00000623419 351 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC006386.2-201ENST00000624491 75 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC012005.1-201ENST00000624575 75 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC019226.1-201ENST00000625666 515 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 DDX10P1-201ENST00000448545 1933 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC009902.3-201ENST00000606235 2172 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.91□□□□□ -1.94
LHX3Q9UBR4 GABRG2-229ENST00000641017 3628 ntBASIC2.91□□□□□ -1.94
LHX3Q9UBR4 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.9□□□□□ -1.94
LHX3Q9UBR4 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.9□□□□□ -1.94
LHX3Q9UBR4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.9□□□□□ -1.95
LHX3Q9UBR4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
LHX3Q9UBR4 RNU6-525P-201ENST00000363685 104 ntBASIC2.9□□□□□ -1.95
LHX3Q9UBR4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.9□□□□□ -1.95
LHX3Q9UBR4 MIR514A1-201ENST00000385133 98 ntBASIC2.9□□□□□ -1.95
LHX3Q9UBR4 MIR1305-201ENST00000408300 86 ntBASIC2.9□□□□□ -1.95
LHX3Q9UBR4 NDUFB4P7-201ENST00000423198 363 ntBASIC2.9□□□□□ -1.95
LHX3Q9UBR4 XKRYP1-201ENST00000423438 492 ntBASIC2.9□□□□□ -1.95
LHX3Q9UBR4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.9□□□□□ -1.95
LHX3Q9UBR4 AC008850.1-201ENST00000427546 362 ntBASIC2.9□□□□□ -1.95
LHX3Q9UBR4 AL590383.1-201ENST00000428602 75 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms