Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC093156.1-201ENST00000440382 670 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AL732372.2-207ENST00000445840 183 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 SNRPGP6-201ENST00000451124 220 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AL353691.1-201ENST00000451332 387 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 SEPT14P2-201ENST00000453405 183 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AMD1P1-201ENST00000457220 922 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 RPL29P14-201ENST00000495837 428 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 HMGN1P12-201ENST00000499125 195 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 OR5H5P-201ENST00000503164 928 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AC025465.4-201ENST00000513422 638 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 SEPT14P4-201ENST00000513445 186 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 RNU6-835P-201ENST00000516974 104 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 RNA5SP337-201ENST00000517007 109 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 FO082796.1-201ENST00000523795 183 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 RAB11AP2-201ENST00000545905 639 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AC060771.1-201ENST00000582031 164 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 MIR4298-201ENST00000584380 73 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 KC877982.1-201ENST00000602313 470 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AL035413.2-201ENST00000604801 525 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AC004853.1-201ENST00000604902 698 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 HMGN2P28-201ENST00000606102 262 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 uc_338.12-201ENST00000616344 181 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AC112200.1-201ENST00000625015 234 ntBASIC4.11□□□□□ -1.75
DKK3Q9UBP4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.11□□□□□ -1.75
DKK3Q9UBP4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AP001148.1-201ENST00000624124 2359 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 MIR372-201ENST00000362225 67 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 RNY4P16-201ENST00000364768 94 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 MIR200C-201ENST00000384980 68 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 U3.29-201ENST00000391296 212 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AL358472.1-201ENST00000431295 329 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 GPR143P-201ENST00000434155 205 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 RPL21P89-201ENST00000444021 467 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AC079781.2-201ENST00000446424 169 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 MTND1P9-201ENST00000453775 944 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 RNU6-261P-201ENST00000459506 102 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 COX7A2P2-201ENST00000505291 250 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 RNU7-143P-201ENST00000516781 65 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 OR4T1P-201ENST00000554933 911 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AC055876.1-202ENST00000567053 138 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 CYP4A43P-201ENST00000568156 121 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AL356055.1-201ENST00000602528 446 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AC025449.1-201ENST00000603896 529 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AC025588.3-201ENST00000604182 274 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AL160281.1-201ENST00000605307 311 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 U7.8-201ENST00000619968 63 ntBASIC4.1□□□□□ -1.75
DKK3Q9UBP4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
DKK3Q9UBP4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DKK3Q9UBP4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
DKK3Q9UBP4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DKK3Q9UBP4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.09□□□□□ -1.75
DKK3Q9UBP4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
DKK3Q9UBP4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DKK3Q9UBP4 AC127526.1-201ENST00000417526 366 ntBASIC4.09□□□□□ -1.75
DKK3Q9UBP4 ELOCP4-201ENST00000420090 333 ntBASIC4.09□□□□□ -1.75
DKK3Q9UBP4 AC091390.3-201ENST00000426478 338 ntBASIC4.09□□□□□ -1.75
DKK3Q9UBP4 GTF2IP20-201ENST00000431663 360 ntBASIC4.09□□□□□ -1.75
DKK3Q9UBP4 TIMM9P1-201ENST00000436122 256 ntBASIC4.09□□□□□ -1.75
DKK3Q9UBP4 HLA-N-201ENST00000437516 135 ntBASIC4.09□□□□□ -1.75
DKK3Q9UBP4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
DKK3Q9UBP4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.09□□□□□ -1.75
DKK3Q9UBP4 RPS4XP10-201ENST00000465034 731 ntBASIC4.09□□□□□ -1.75
DKK3Q9UBP4 RN7SL585P-201ENST00000470538 280 ntBASIC4.09□□□□□ -1.75
DKK3Q9UBP4 AC006517.1-201ENST00000480485 328 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms