Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AC104806.1-201ENST00000508720 308 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 FAM206BP-201ENST00000510179 541 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 PPBPP1-201ENST00000510807 373 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 RNA5SP154-201ENST00000516193 111 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 OR5B10P-201ENST00000532869 642 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AC012182.1-201ENST00000570133 895 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 MIR4742-201ENST00000581069 85 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 MIR4270-201ENST00000581799 70 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 MIR3941-201ENST00000582572 103 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AC005498.1-201ENST00000592125 465 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AC012669.1-201ENST00000603209 283 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 MIR1302-2-201ENST00000607096 138 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AC104237.2-201ENST00000612456 443 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AL442067.2-201ENST00000614033 363 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AC100827.5-201ENST00000615883 426 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 RMST_7.1-201ENST00000621935 268 ntBASIC3.93□□□□□ -1.78
VSX1Q9NZR4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VSX1Q9NZR4 TPTE2P4-201ENST00000258589 1605 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 SNORA23-201ENST00000365128 182 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 RNU4-20P-201ENST00000365601 151 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 SNORD3H-201ENST00000384486 214 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 MIR3065-201ENST00000390137 79 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC110754.1-201ENST00000399740 601 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 Y_RNA.615-201ENST00000410769 117 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 RPS20P14-201ENST00000412545 360 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 USP9YP20-201ENST00000419224 558 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AL451054.2-201ENST00000420896 202 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 HSPE1P1-201ENST00000421494 318 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 PPP1R11P2-201ENST00000423543 382 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 RPL7P46-201ENST00000425129 740 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 KCTD9P3-201ENST00000434597 1169 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC236972.2-201ENST00000434979 310 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 HMGB1P18-201ENST00000438801 619 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 ABCF2P2-201ENST00000450549 296 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AL118520.1-201ENST00000450770 291 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC010631.1-201ENST00000474150 156 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC108145.1-201ENST00000503770 153 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AL592156.1-201ENST00000508758 304 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC098591.2-201ENST00000510152 315 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC108078.2-201ENST00000510750 236 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 RNU4-49P-201ENST00000516080 140 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 Y_RNA.701-201ENST00000516812 110 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 RNU6-685P-201ENST00000517088 95 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC103843.2-201ENST00000530523 682 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC010928.3-201ENST00000587712 541 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC110741.2-201ENST00000605278 268 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AL390240.1-201ENST00000612950 384 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AL450472.3-201ENST00000615578 367 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC068831.8-201ENST00000620171 435 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AL357559.1-201ENST00000622228 274 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AC019278.1-201ENST00000623516 479 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 AP004289.2-201ENST00000444413 1457 ntBASIC3.92□□□□□ -1.78
VSX1Q9NZR4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.92□□□□□ -1.78
VSX1Q9NZR4 RN7SKP103-201ENST00000363848 320 ntBASIC3.91□□□□□ -1.78
VSX1Q9NZR4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
VSX1Q9NZR4 Y_RNA.474-201ENST00000384341 102 ntBASIC3.91□□□□□ -1.78
VSX1Q9NZR4 Y_RNA.576-201ENST00000384781 102 ntBASIC3.91□□□□□ -1.78
VSX1Q9NZR4 MIR124-3-201ENST00000384866 87 ntBASIC3.91□□□□□ -1.78
VSX1Q9NZR4 AL583834.1-201ENST00000406943 343 ntBASIC3.91□□□□□ -1.78
VSX1Q9NZR4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.91□□□□□ -1.78
VSX1Q9NZR4 MIR1911-201ENST00000410783 80 ntBASIC3.91□□□□□ -1.78
VSX1Q9NZR4 RPL7AP73-201ENST00000413490 353 ntBASIC3.91□□□□□ -1.78
VSX1Q9NZR4 AC114491.1-201ENST00000416095 246 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms