Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC090616.3-201ENST00000582184 217 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 MIR3670-2-201ENST00000582974 65 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 MIR3605-201ENST00000583214 100 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 MIR3670-1-201ENST00000584160 65 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 MIR3670-3-201ENST00000584855 65 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 HMGN2P15-201ENST00000585707 270 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 AP001269.3-201ENST00000588718 329 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 DUXAP3-201ENST00000603616 594 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 AL357094.1-201ENST00000603845 844 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 AC069431.2-201ENST00000604149 1099 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 AC006270.3-201ENST00000605967 1036 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 AC131235.4-201ENST00000609288 620 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 MIR3670-4-201ENST00000612260 65 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 AC107075.1-201ENST00000613695 314 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 AL138960.2-201ENST00000625145 535 ntBASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.91□□□□□ -2.1
SND1-IT1Q9HBX3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
SND1-IT1Q9HBX3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 RPL17P12-201ENST00000413391 526 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 MTCO3P45-201ENST00000443036 613 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 NANOGNBP1-201ENST00000448444 480 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 RPL26P9-201ENST00000457466 433 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 MRPS17P3-201ENST00000465453 385 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC103975.1-201ENST00000482506 483 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 HMGB1P36-201ENST00000487709 576 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC108729.1-201ENST00000487812 947 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AL160314.1-201ENST00000490836 438 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC098799.2-201ENST00000509466 868 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC112206.4-201ENST00000515142 405 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC109329.2-201ENST00000519658 482 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 COX6CP5-201ENST00000527162 228 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AL606834.2-201ENST00000602954 668 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AF129408.1-201ENST00000608767 431 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC039056.2-201ENST00000622261 511 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC091953.5-201ENST00000622919 233 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC116618.1-201ENST00000634617 774 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC012442.3-202ENST00000636742 206 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 AC099063.3-201ENST00000642066 185 ntBASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
SND1-IT1Q9HBX3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 SNORA9.2-201ENST00000365361 133 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 Y_RNA.465-201ENST00000384293 102 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 MIR1193-201ENST00000408109 78 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 RPL7P8-201ENST00000411964 730 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 USP9YP33-201ENST00000412220 421 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC096649.2-201ENST00000416186 393 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AL096701.2-201ENST00000416920 238 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 RPS25P9-201ENST00000435591 252 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 USP9YP35-201ENST00000435696 412 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 RPS15AP5-201ENST00000436276 388 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 Z75741.1-201ENST00000446793 314 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 PDSS1P2-201ENST00000449397 678 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms