Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 MTND4LP10-201ENST00000435146 291 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 RPL7P52-201ENST00000449200 742 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 ANKRD26P4-201ENST00000455755 950 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AC126182.1-201ENST00000478134 357 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 RNU6-150P-201ENST00000516237 95 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AC024224.1-201ENST00000538284 609 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AL157394.1-201ENST00000562983 1224 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AC009094.1-201ENST00000564443 426 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AP001350.1-201ENST00000601906 1524 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AL596327.1-201ENST00000603629 213 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AC010738.1-201ENST00000604970 987 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AC055876.5-201ENST00000605667 259 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 AC011477.1-204ENST00000623416 1325 ntBASIC3.06□□□□□ -1.92
RNF41Q9H4P4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF41Q9H4P4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 SNORA4.1-201ENST00000364263 144 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 U8.9-201ENST00000365667 134 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 MIR592-201ENST00000384959 97 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AL031679.1-201ENST00000400616 525 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC010099.3-201ENST00000423896 409 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AL390023.1-201ENST00000428836 262 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 YWHAZP7-201ENST00000436906 631 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 RPL21P8-201ENST00000465083 535 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC010285.1-201ENST00000470580 392 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC023424.2-201ENST00000493479 777 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC096751.1-202ENST00000502691 1067 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC006390.1-201ENST00000508068 283 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC109635.4-202ENST00000531666 412 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC018630.1-201ENST00000541376 925 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC005951.1-201ENST00000576706 485 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC023043.3-201ENST00000593113 385 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC006023.1-201ENST00000603944 259 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC024560.3-201ENST00000608482 349 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC069234.5-201ENST00000611056 416 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC087683.2-201ENST00000611384 326 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC002076.2-201ENST00000617362 122 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 AC017037.3-201ENST00000625016 472 ntBASIC3.05□□□□□ -1.92
RNF41Q9H4P4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RNF41Q9H4P4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AL356473.1-201ENST00000406203 1408 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 RNU6-433P-201ENST00000363216 104 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 RNU6-777P-201ENST00000364265 104 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 SNORA26.7-201ENST00000391288 122 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 RPS4XP8-201ENST00000402039 771 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 CYCSP45-201ENST00000402289 315 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 RNU2-47P-201ENST00000410649 186 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 RNA5SP344-201ENST00000411081 104 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 RNU2-71P-201ENST00000411395 189 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 MTATP6P27-201ENST00000416987 621 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC099677.1-201ENST00000420575 175 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC019178.2-201ENST00000423595 505 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 MTCO1P27-201ENST00000448269 226 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 CACYBPP2-201ENST00000453625 678 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 Z82190.1-201ENST00000454534 490 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 BX322784.1-201ENST00000455793 1077 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 MTND4LP22-201ENST00000508209 276 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC090136.1-201ENST00000520009 240 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 UBTFL10-201ENST00000528532 562 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC007536.1-201ENST00000533382 349 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms