Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ISCA1P3-201ENST00000577104 373 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 MIR4458-201ENST00000578872 75 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 MIR4666A-201ENST00000580160 79 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC245884.10-201ENST00000597355 337 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 RPP40P2-201ENST00000603596 712 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.6-201ENST00000603753 252 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.11-201ENST00000604059 253 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.10-201ENST00000604330 253 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC008162.1-201ENST00000604718 254 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.1-201ENST00000604752 252 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.2-201ENST00000604983 252 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.5-201ENST00000605253 252 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.4-201ENST00000605279 254 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.12-201ENST00000605291 253 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.8-201ENST00000605353 252 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.9-201ENST00000605428 253 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AL670379.7-201ENST00000605823 252 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC009974.1-201ENST00000608881 455 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC022960.3-201ENST00000619794 441 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC011460.1-201ENST00000636268 1834 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC110774.1-201ENST00000623567 2018 ntBASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SHROOM3Q8TF72 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 SNORA31-201ENST00000362607 130 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 RNU5B-1-201ENST00000363286 116 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 RNU6-236P-201ENST00000363886 106 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 Y_RNA.578-201ENST00000390903 88 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AL133264.1-201ENST00000407157 562 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 RNU2-37P-201ENST00000410695 177 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 DPRXP1-201ENST00000426312 460 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC109583.1-201ENST00000432156 268 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 PTGES3P1-201ENST00000439531 483 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 HSPE1P28-201ENST00000443139 211 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC027673.1-201ENST00000456245 405 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC084024.2-201ENST00000503480 791 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 MTCO1P30-201ENST00000515244 580 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 Y_RNA.670-201ENST00000516255 105 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC087241.2-201ENST00000535801 324 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC016597.2-201ENST00000613256 341 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC034102.8-201ENST00000615146 484 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC092650.2-201ENST00000619984 902 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC123767.1-202ENST00000620407 817 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AP002782.1-201ENST00000623107 614 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 MIR4496-201ENST00000635896 61 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 ZNF663P-202ENST00000641770 1131 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AP005901.5-201ENST00000545779 1796 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 SGO1P1-201ENST00000603525 1447 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AP000568.1-201ENST00000282964 442 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AL356292.1-201ENST00000283110 373 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 RNU4-51P-201ENST00000364206 140 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 MIR221-201ENST00000385135 110 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 FCF1P2-201ENST00000415284 583 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 MTCYBP32-201ENST00000427945 1084 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC092393.1-201ENST00000439625 742 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AL645638.1-201ENST00000440519 361 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC068781.1-201ENST00000488231 618 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC055855.1-201ENST00000489563 579 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 HMGB3P15-201ENST00000507326 574 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 MTND4LP22-201ENST00000508209 276 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 RNU6-1053P-201ENST00000515930 101 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AP001542.2-201ENST00000593141 364 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC013468.1-201ENST00000608680 598 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AP000240.1-201ENST00000609910 452 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 PART1_2.1-201ENST00000612397 250 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AL121895.2-201ENST00000619558 447 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AL157770.1-201ENST00000623049 439 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 AC068787.1-201ENST00000623908 691 ntBASIC2.18□□□□□ -2.06
SHROOM3Q8TF72 MTND4P8-201ENST00000514997 1362 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms