Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 MIRLET7G-201ENST00000362280 84 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 SNORD56.5-201ENST00000364281 72 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AC023050.1-201ENST00000498198 304 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 RNU6-347P-201ENST00000516658 105 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 DUXAP4-201ENST00000603046 613 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AC112191.3-201ENST00000604371 277 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AC083806.3-201ENST00000614016 455 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AL449363.1-201ENST00000617815 186 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 DDX10P1-201ENST00000448545 1933 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AP000567.1-201ENST00000406413 156 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 SNORA81-201ENST00000408493 178 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 HSPE1P1-201ENST00000421494 318 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 RFC5P1-201ENST00000454419 874 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AC021146.7-201ENST00000509604 775 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 RNA5SP468-201ENST00000516782 93 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 SNORD59.2-201ENST00000516873 68 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 OR6C73P-201ENST00000546432 358 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 XIST_intron.1-201ENST00000619444 68 ntBASIC1.01□□□□□ -2.25
CSMD3Q7Z407 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.01□□□□□ -2.25
CSMD3Q7Z407 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
CSMD3Q7Z407 CNOT6LP1-201ENST00000559681 1462 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1□□□□□ -2.25
CSMD3Q7Z407 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CSMD3Q7Z407 RNU6-516P-201ENST00000411381 104 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 MTCO1P43-201ENST00000431831 488 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CSMD3Q7Z407 RPS26P56-201ENST00000444468 240 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1□□□□□ -2.25
CSMD3Q7Z407 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1□□□□□ -2.25
CSMD3Q7Z407 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1□□□□□ -2.25
CSMD3Q7Z407 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1□□□□□ -2.25
CSMD3Q7Z407 SUB1P4-201ENST00000566062 339 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1□□□□□ -2.25
CSMD3Q7Z407 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1□□□□□ -2.25
CSMD3Q7Z407 AC135776.4-201ENST00000624300 1904 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1□□□□□ -2.25
CSMD3Q7Z407 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1□□□□□ -2.25
CSMD3Q7Z407 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1□□□□□ -2.25
CSMD3Q7Z407 BLOC1S2P1-201ENST00000428431 301 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1□□□□□ -2.25
CSMD3Q7Z407 AC104308.1-201ENST00000454621 333 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1□□□□□ -2.25
CSMD3Q7Z407 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 AC018630.2-201ENST00000534866 2403 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CSMD3Q7Z407 RAD23BP2-201ENST00000416003 1207 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 HAR1A.1-201ENST00000459583 118 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1□□□□□ -2.25
CSMD3Q7Z407 AC092902.1-201ENST00000486999 259 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 AF279873.1-201ENST00000523393 313 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 AC090970.3-201ENST00000612566 866 ntBASIC1□□□□□ -2.25
CSMD3Q7Z407 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1□□□□□ -2.25
CSMD3Q7Z407 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1□□□□□ -2.25
CSMD3Q7Z407 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1□□□□□ -2.25
CSMD3Q7Z407 RNA5SP257-201ENST00000363023 116 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 RNU6-799P-201ENST00000363567 107 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 MCTS2P-201ENST00000394552 546 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 RNU2-71P-201ENST00000411395 189 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AL157827.1-201ENST00000447622 132 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AP002345.1-201ENST00000456493 928 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AC089999.1-201ENST00000460336 374 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AC004223.1-201ENST00000479840 271 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AC016727.2-201ENST00000603988 621 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AL121917.1-203ENST00000605534 577 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AC090617.7-201ENST00000623952 126 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
CSMD3Q7Z407 SNORA16.1-201ENST00000364597 132 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 SNORA51.12-201ENST00000384448 134 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 SNORA40.6-201ENST00000391153 128 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AL445669.1-201ENST00000426743 755 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CSMD3Q7Z407 HMGN2P13-201ENST00000476476 274 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AC008837.2-201ENST00000513076 418 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CSMD3Q7Z407 AC068338.1-201ENST00000565567 176 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 RPL23AP88-201ENST00000605759 454 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CSMD3Q7Z407 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CSMD3Q7Z407 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CSMD3Q7Z407 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.99□□□□□ -2.25
CSMD3Q7Z407 RPL31P2-201ENST00000413849 377 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms