Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RNU1-39P-201ENST00000383897 165 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 CIR1P3-201ENST00000405137 479 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 MTND1P23-201ENST00000416931 372 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 MTATP6P18-201ENST00000417994 673 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 HMGB3P20-201ENST00000417997 600 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 MTATP6P4-201ENST00000427725 675 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 MRPS10P2-201ENST00000431226 381 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC024082.2-201ENST00000434771 238 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC140076.1-201ENST00000449897 361 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 SNRPGP6-201ENST00000451124 220 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 FGF7P6-202ENST00000451282 293 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC079382.1-201ENST00000493346 557 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 KLHL2P1-201ENST00000508691 521 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC105914.1-201ENST00000511798 226 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 SNORA31.9-201ENST00000516429 84 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC022695.1-201ENST00000522089 237 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC109635.4-202ENST00000531666 412 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC128657.1-201ENST00000549459 145 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 HMGB1P33-201ENST00000563485 527 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 FAM60BP-201ENST00000578364 658 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC006270.2-201ENST00000578523 652 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC023575.1-201ENST00000580510 358 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 SNORD84-203ENST00000584275 78 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC025449.1-201ENST00000603896 529 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC067959.1-201ENST00000604334 379 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC139792.3-201ENST00000623525 224 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 AC009161.2-201ENST00000624626 138 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 MIR7641-1-201ENST00000627518 61 ntBASIC3.39□□□□□ -1.87
SHFQ7M4L6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHFQ7M4L6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHFQ7M4L6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHFQ7M4L6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHFQ7M4L6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.39□□□□□ -1.87
SHFQ7M4L6 HSPE1P11-201ENST00000339579 310 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 Y_RNA.9-201ENST00000362354 101 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 RNU6-283P-201ENST00000364788 107 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 RNU6-1283P-201ENST00000365314 105 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 RNU6-76P-201ENST00000384060 104 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 Y_RNA.450-201ENST00000384198 113 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 RNU6-74P-201ENST00000384235 107 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 MIR585-201ENST00000384887 94 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 MIR1-2-201ENST00000384961 85 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 RPS26P8-201ENST00000393490 348 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC068050.1-201ENST00000394891 380 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 RPS4XP8-201ENST00000402039 771 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 DUTP6-201ENST00000425573 462 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 AL139415.2-201ENST00000431968 163 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 RPL26P6-201ENST00000440913 438 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 RPL23AP20-201ENST00000447965 421 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 MTND2P24-201ENST00000453434 806 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 RNU6-410P-201ENST00000517006 107 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC100870.1-201ENST00000522035 505 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 OR5AQ1P-201ENST00000527596 927 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AP003034.1-201ENST00000534621 422 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC092325.1-201ENST00000566449 554 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC012182.1-201ENST00000570133 895 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 MIR3939-201ENST00000582614 106 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC098848.2-201ENST00000588023 330 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 AL606834.2-201ENST00000602954 668 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC012507.3-201ENST00000603556 477 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 Z84480.1-201ENST00000605131 311 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 BX323046.1-201ENST00000610145 535 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC007014.2-201ENST00000615581 479 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC112484.5-201ENST00000624189 228 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 AC138649.5-201ENST00000637456 137 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 MIR492-201ENST00000638676 116 ntBASIC3.38□□□□□ -1.87
SHFQ7M4L6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms