Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNA5SP107-201ENST00000411358 122 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 MTND5P25-201ENST00000430499 799 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC073063.1-201ENST00000434352 607 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 RPL37P21-201ENST00000435890 276 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 ARPC3P1-201ENST00000437218 533 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 SNRPGP6-201ENST00000451124 220 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AP002884.2-201ENST00000471647 395 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC025518.1-201ENST00000479856 347 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC100870.1-201ENST00000522035 505 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC007458.1-201ENST00000542812 373 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC005476.1-201ENST00000554427 397 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC040904.1-201ENST00000590850 223 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC018714.1-201ENST00000605028 208 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC107294.3-201ENST00000609211 526 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 AC006927.3-201ENST00000638789 384 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 PABPC1P9-201ENST00000426076 1612 ntBASIC3.04□□□□□ -1.92
NHLRC1Q6VVB1 CCT4P2-201ENST00000233836 1548 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AL079305.1-201ENST00000623159 3008 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 MTND4P16-201ENST00000466108 1367 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC093010.3-201ENST00000570269 15214 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 RNU5A-8P-201ENST00000364102 114 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 RNU2-62P-201ENST00000410868 191 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 MRPL50P2-201ENST00000416821 482 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC012498.1-201ENST00000424037 437 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 DPPA2P1-201ENST00000428060 556 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AL512649.1-201ENST00000428997 581 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 CETN4P-201ENST00000432407 469 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC129850.1-201ENST00000436203 508 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 HMGB3P11-201ENST00000440127 604 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 BMI1P1-201ENST00000445879 941 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC010099.1-201ENST00000455434 375 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC013267.1-201ENST00000458227 267 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC004263.1-201ENST00000479327 332 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AL160314.1-201ENST00000490836 438 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC093663.1-201ENST00000497190 394 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC006499.5-201ENST00000505037 514 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 NRON-201ENST00000517270 370 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC093331.1-201ENST00000521474 169 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC009094.1-201ENST00000564443 426 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 RPL23AP78-201ENST00000599928 470 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC008277.2-201ENST00000605196 797 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC107214.2-201ENST00000608204 634 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC239868.4-201ENST00000608318 671 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC084757.4-201ENST00000616350 526 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AL355493.4-201ENST00000618530 292 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 AC131159.1-201ENST00000621854 213 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 FRG1KP-201ENST00000623592 341 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 CR383658.2-201ENST00000547576 1525 ntBASIC3.03□□□□□ -1.92
NHLRC1Q6VVB1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.03□□□□□ -1.93
NHLRC1Q6VVB1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
NHLRC1Q6VVB1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.93
NHLRC1Q6VVB1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.03□□□□□ -1.93
NHLRC1Q6VVB1 AC091564.4-201ENST00000533934 2194 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 AP003122.5-201ENST00000527668 3766 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 RNA5SP387-201ENST00000364226 106 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 CD24P4-201ENST00000382840 243 ntBASIC3.02□□□□□ -1.93
NHLRC1Q6VVB1 RNU6-198P-201ENST00000384258 104 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms