Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.89□□□□□ -1.95
NCBP1Q09161 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.89□□□□□ -1.95
NCBP1Q09161 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.89□□□□□ -1.95
NCBP1Q09161 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.89□□□□□ -1.95
NCBP1Q09161 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.89□□□□□ -1.95
NCBP1Q09161 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.89□□□□□ -1.95
NCBP1Q09161 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.89□□□□□ -1.95
NCBP1Q09161 MIR4635-201ENST00000583759 79 ntBASIC2.89□□□□□ -1.95
NCBP1Q09161 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.89□□□□□ -1.95
NCBP1Q09161 RNU6-1192P-201ENST00000612197 107 ntBASIC2.89□□□□□ -1.95
NCBP1Q09161 AC243773.3-201ENST00000613270 256 ntBASIC2.89□□□□□ -1.95
NCBP1Q09161 AC006213.4-201ENST00000616184 634 ntBASIC2.89□□□□□ -1.95
NCBP1Q09161 RNU6-489P-201ENST00000618289 107 ntBASIC2.89□□□□□ -1.95
NCBP1Q09161 AC011330.2-201ENST00000621680 635 ntBASIC2.89□□□□□ -1.95
NCBP1Q09161 AC008568.2-201ENST00000623862 2313 ntBASIC2.89□□□□□ -1.95
NCBP1Q09161 CDR1-202ENST00000625883 1485 ntBASIC2.89□□□□□ -1.95
NCBP1Q09161 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NCBP1Q09161 MIR449A-201ENST00000362113 91 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 SNORD62.1-201ENST00000362541 86 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NCBP1Q09161 RNU1-138P-201ENST00000384093 164 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 RNU6-1257P-201ENST00000384625 110 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NCBP1Q09161 MRPS36P1-201ENST00000421291 307 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.88□□□□□ -1.95
NCBP1Q09161 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.88□□□□□ -1.95
NCBP1Q09161 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.88□□□□□ -1.95
NCBP1Q09161 AC073901.1-201ENST00000462471 408 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 SRIP1-201ENST00000489235 288 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.88□□□□□ -1.95
NCBP1Q09161 SEM1P1-201ENST00000506694 209 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 RAC1P5-201ENST00000512182 576 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 SNORA19.3-201ENST00000516165 130 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NCBP1Q09161 HSPA8P13-201ENST00000523715 472 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.88□□□□□ -1.95
NCBP1Q09161 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.88□□□□□ -1.95
NCBP1Q09161 MIR3609-201ENST00000582661 80 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 RPL23AP78-201ENST00000599928 470 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 BNIP3P31-201ENST00000604515 566 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 AC069545.1-201ENST00000605671 358 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 AC080013.4-201ENST00000607624 649 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 MIR6817-201ENST00000615588 66 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 SNHG22-203ENST00000617833 660 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 AL138955.1-201ENST00000622881 1040 ntBASIC2.88□□□□□ -1.95
NCBP1Q09161 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NCBP1Q09161 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.87□□□□□ -1.95
NCBP1Q09161 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NCBP1Q09161 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NCBP1Q09161 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.87□□□□□ -1.95
NCBP1Q09161 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NCBP1Q09161 AL139039.1-201ENST00000401900 692 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AL356057.3-201ENST00000402607 340 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 FO393413.1-201ENST00000402892 195 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AL592310.1-201ENST00000414330 671 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AC108734.3-201ENST00000481241 1165 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.87□□□□□ -1.95
NCBP1Q09161 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.87□□□□□ -1.95
NCBP1Q09161 AC107222.1-201ENST00000510899 637 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AC112206.4-201ENST00000515142 405 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 RNA5SP282-201ENST00000516355 108 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.87□□□□□ -1.95
NCBP1Q09161 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.87□□□□□ -1.95
NCBP1Q09161 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NCBP1Q09161 HIGD1AP17-201ENST00000554576 276 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.87□□□□□ -1.95
NCBP1Q09161 AL606834.3-201ENST00000602615 496 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AC024060.1-201ENST00000607052 494 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AL450472.3-201ENST00000615578 367 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.87□□□□□ -1.95
NCBP1Q09161 AC104985.3-201ENST00000623479 597 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 IGHVIII-44-202ENST00000636235 289 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 AC106858.1-201ENST00000637497 429 ntBASIC2.87□□□□□ -1.95
NCBP1Q09161 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
NCBP1Q09161 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
NCBP1Q09161 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.87□□□□□ -1.95
NCBP1Q09161 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NCBP1Q09161 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NCBP1Q09161 U8.8-201ENST00000365399 135 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 SNORA80E-201ENST00000384744 137 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
NCBP1Q09161 AL355143.1-201ENST00000407101 841 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.86□□□□□ -1.95
NCBP1Q09161 AL139421.1-201ENST00000423010 169 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.86□□□□□ -1.95
NCBP1Q09161 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.86□□□□□ -1.95
NCBP1Q09161 AL049829.1-201ENST00000465411 156 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 SETP11-201ENST00000473027 690 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 AC069528.1-202ENST00000482888 637 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.86□□□□□ -1.95
NCBP1Q09161 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.86□□□□□ -1.95
NCBP1Q09161 RNU4-29P-201ENST00000515943 174 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 SLC2A13P1-201ENST00000531560 322 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 AP002770.2-201ENST00000543613 532 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.86□□□□□ -1.95
NCBP1Q09161 AC009097.3-201ENST00000563557 1018 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 MIR3921-201ENST00000577308 85 ntBASIC2.86□□□□□ -1.95
NCBP1Q09161 MIR4446-201ENST00000578505 67 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms