Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC015712.3-201ENST00000559380 164 ntBASIC2.44□□□□□ -2.02
CLDN6P56747 AC090695.1-201ENST00000561269 1222 ntBASIC2.44□□□□□ -2.02
CLDN6P56747 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.44□□□□□ -2.02
CLDN6P56747 MIR4648-201ENST00000580107 72 ntBASIC2.44□□□□□ -2.02
CLDN6P56747 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN6P56747 AL592148.2-201ENST00000612210 372 ntBASIC2.44□□□□□ -2.02
CLDN6P56747 AL157770.1-201ENST00000623049 439 ntBASIC2.44□□□□□ -2.02
CLDN6P56747 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CLDN6P56747 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN6P56747 AC241585.2-209ENST00000638217 143 ntBASIC2.44□□□□□ -2.02
CLDN6P56747 MKKS-204ENST00000639674 192 ntBASIC2.44□□□□□ -2.02
CLDN6P56747 AC010680.1-201ENST00000590024 3590 ntBASIC2.44□□□□□ -2.02
CLDN6P56747 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDN6P56747 AC026241.1-201ENST00000517873 2142 ntBASIC2.44□□□□□ -2.02
CLDN6P56747 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN6P56747 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN6P56747 RNU6-707P-201ENST00000364647 95 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 MIR27B-201ENST00000385129 97 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 RNA5SP354-201ENST00000391247 136 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 MTATP6P27-201ENST00000416987 621 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 AC092634.2-201ENST00000428146 1010 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN6P56747 FCF1P1-201ENST00000432690 571 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN6P56747 AC092427.1-201ENST00000439177 601 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN6P56747 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.43□□□□□ -2.02
CLDN6P56747 MTCYBP11-201ENST00000447254 1109 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN6P56747 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN6P56747 AC008571.1-201ENST00000467232 300 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 RN7SL297P-201ENST00000483161 293 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 RPS27P26-201ENST00000494583 239 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN6P56747 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN6P56747 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 IGKV3-31-201ENST00000523109 329 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.43□□□□□ -2.02
CLDN6P56747 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.43□□□□□ -2.02
CLDN6P56747 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN6P56747 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN6P56747 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN6P56747 AC004853.1-201ENST00000604902 698 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 AL359198.2-201ENST00000611836 194 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 AC009159.1-201ENST00000618386 642 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 AC084824.4-201ENST00000620106 731 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
CLDN6P56747 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN6P56747 AC073308.1-201ENST00000623696 305 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN6P56747 OR5H6-203ENST00000642105 978 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 AC008669.1-201ENST00000565823 2178 ntBASIC2.43□□□□□ -2.02
CLDN6P56747 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
CLDN6P56747 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CLDN6P56747 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CLDN6P56747 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.42□□□□□ -2.02
CLDN6P56747 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN6P56747 AL512633.1-201ENST00000399931 655 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 AL603865.2-201ENST00000401679 213 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 RNU4-26P-201ENST00000410270 107 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 RNA5SP425-201ENST00000410336 112 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 RNA5SP492-201ENST00000411330 114 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 RPL19P1-201ENST00000411635 428 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN6P56747 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN6P56747 AL590383.1-201ENST00000428602 75 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 MTCO1P3-201ENST00000429327 192 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 HMGB1P18-201ENST00000438801 619 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 AC009296.1-201ENST00000443146 155 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 AC009237.8-201ENST00000445492 379 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN6P56747 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN6P56747 RNU6-420P-201ENST00000458780 107 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 snoU13.23-201ENST00000458863 104 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.42□□□□□ -2.02
CLDN6P56747 AC108210.2-201ENST00000503681 201 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN6P56747 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.42□□□□□ -2.02
CLDN6P56747 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN6P56747 AL445435.1-201ENST00000604232 665 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN6P56747 AC046143.2-201ENST00000609789 160 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 AC025588.4-201ENST00000615802 908 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 AC090132.2-201ENST00000615881 347 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 AC010975.3-201ENST00000618727 978 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 U4.3-201ENST00000621047 82 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 ZNF519P1-201ENST00000449011 1626 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 AC097714.1-201ENST00000511272 1647 ntBASIC2.42□□□□□ -2.02
CLDN6P56747 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN6P56747 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN6P56747 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN6P56747 SNRPEP3-201ENST00000338402 276 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 RNU6-270P-201ENST00000364131 105 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 MIR325-201ENST00000385260 98 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 SNORD65.1-201ENST00000390889 71 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 RPL7P27-201ENST00000403775 720 ntBASIC2.41□□□□□ -2.02
CLDN6P56747 BX682237.1-201ENST00000415016 335 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms