Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 RNA5SP49-201ENST00000516450 115 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 RNU6-358P-201ENST00000516564 75 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 Y_RNA.689-201ENST00000516589 107 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 RNA5SP309-201ENST00000516670 106 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.86□□□□□ -1.79
SUMO3P55854 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.86□□□□□ -1.79
SUMO3P55854 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.86□□□□□ -1.79
SUMO3P55854 AC004024.1-201ENST00000549244 247 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 HSPE1P5-201ENST00000561489 272 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 CYP4A43P-201ENST00000568156 121 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.86□□□□□ -1.79
SUMO3P55854 AC008945.2-201ENST00000606056 604 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 AC012409.4-201ENST00000612923 249 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 AL359547.2-201ENST00000615810 418 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 AC079684.1-201ENST00000621405 437 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 AC048347.1-201ENST00000624621 427 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SUMO3P55854 AL672296.1-201ENST00000427780 2158 ntBASIC3.86□□□□□ -1.79
SUMO3P55854 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.86□□□□□ -1.79
SUMO3P55854 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SUMO3P55854 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.85□□□□□ -1.79
SUMO3P55854 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SUMO3P55854 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.85□□□□□ -1.79
SUMO3P55854 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
SUMO3P55854 RNU6-1287P-201ENST00000362914 107 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 RNU1-132P-201ENST00000364300 164 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
SUMO3P55854 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SUMO3P55854 RNU6-190P-201ENST00000384154 102 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 RNU6-1060P-201ENST00000384664 107 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 AL583835.1-201ENST00000399570 407 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 RNA5SP36-201ENST00000410197 133 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 RPL23AP26-201ENST00000412728 464 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 FAR2P2-201ENST00000413041 594 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 AC091390.3-201ENST00000426478 338 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.85□□□□□ -1.79
SUMO3P55854 HMGB1P31-201ENST00000437242 427 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 RPL23AP89-201ENST00000439324 255 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 MTATP6P23-201ENST00000440153 476 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 CBWD4P-201ENST00000445695 655 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 PRDX3P3-201ENST00000447765 522 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.85□□□□□ -1.79
SUMO3P55854 AL118520.1-201ENST00000450770 291 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.85□□□□□ -1.79
SUMO3P55854 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.85□□□□□ -1.79
SUMO3P55854 AL162395.1-201ENST00000457882 422 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 RNA5SP246-201ENST00000458909 119 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 UQCRHP4-201ENST00000471686 272 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 AC041039.1-201ENST00000485656 536 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.85□□□□□ -1.79
SUMO3P55854 RNA5SP519-201ENST00000516480 119 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 RNU6-1256P-201ENST00000516539 103 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 RNU6-685P-201ENST00000517088 95 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.85□□□□□ -1.79
SUMO3P55854 ATP5F1P5-201ENST00000526403 760 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 RANP3-201ENST00000530970 276 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 AC118273.2-201ENST00000532092 465 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 OR5B10P-201ENST00000532869 642 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.85□□□□□ -1.79
SUMO3P55854 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SUMO3P55854 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.85□□□□□ -1.79
SUMO3P55854 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.85□□□□□ -1.79
SUMO3P55854 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.85□□□□□ -1.79
SUMO3P55854 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.85□□□□□ -1.79
SUMO3P55854 IPO5P1-202ENST00000600039 287 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 MIR432-201ENST00000606207 94 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 MIR3653-201ENST00000625572 110 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 MIR3662-201ENST00000637030 95 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 AC099654.14-201ENST00000638599 341 ntBASIC3.85□□□□□ -1.79
SUMO3P55854 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SUMO3P55854 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.85□□□□□ -1.79
SUMO3P55854 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SUMO3P55854 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.85□□□□□ -1.79
SUMO3P55854 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SUMO3P55854 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SUMO3P55854 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
SUMO3P55854 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SUMO3P55854 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SUMO3P55854 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SUMO3P55854 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SUMO3P55854 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
SUMO3P55854 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.84□□□□□ -1.79
SUMO3P55854 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SUMO3P55854 RNU6-552P-201ENST00000362869 119 ntBASIC3.84□□□□□ -1.79
SUMO3P55854 AL139397.2-201ENST00000404529 772 ntBASIC3.84□□□□□ -1.79
SUMO3P55854 RNA5SP118-201ENST00000410385 109 ntBASIC3.84□□□□□ -1.79
SUMO3P55854 RNU6-1068P-201ENST00000410958 103 ntBASIC3.84□□□□□ -1.79
SUMO3P55854 RPS12P24-201ENST00000412619 387 ntBASIC3.84□□□□□ -1.79
SUMO3P55854 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SUMO3P55854 Z85995.1-201ENST00000415547 335 ntBASIC3.84□□□□□ -1.79
SUMO3P55854 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.84□□□□□ -1.79
SUMO3P55854 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.84□□□□□ -1.79
SUMO3P55854 RPL7P46-201ENST00000425129 740 ntBASIC3.84□□□□□ -1.79
SUMO3P55854 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SUMO3P55854 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.84□□□□□ -1.79
SUMO3P55854 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.84□□□□□ -1.79
SUMO3P55854 AL353572.1-201ENST00000442490 417 ntBASIC3.84□□□□□ -1.79
SUMO3P55854 MTND4P18-201ENST00000447010 465 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms