Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 HSPE1P6-201ENST00000479457 291 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.64□□□□□ -1.99
PKNOX1P55347 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.64□□□□□ -1.99
PKNOX1P55347 AC006445.2-201ENST00000510061 472 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AC010587.2-201ENST00000511727 448 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 RNA5SP341-201ENST00000516261 117 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 SNORA74D-201ENST00000516404 141 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.64□□□□□ -1.99
PKNOX1P55347 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.64□□□□□ -1.99
PKNOX1P55347 OR7K1P-201ENST00000546439 926 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.64□□□□□ -1.99
PKNOX1P55347 HMGB1P14-201ENST00000557424 591 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PKNOX1P55347 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.64□□□□□ -1.99
PKNOX1P55347 AC009712.1-201ENST00000564938 316 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 MIR3609-201ENST00000582661 80 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AL356575.1-201ENST00000603008 283 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 AC068313.1-201ENST00000604028 1008 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 NUTF2P8-201ENST00000604593 363 ntBASIC2.64□□□□□ -1.99
PKNOX1P55347 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PKNOX1P55347 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.64□□□□□ -1.99
PKNOX1P55347 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AL161781.1-201ENST00000354277 403 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 SNORA25.6-201ENST00000364121 118 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PKNOX1P55347 SNORA36C-201ENST00000384289 132 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 RNU6-1207P-201ENST00000384343 107 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 RNU6-636P-201ENST00000384598 107 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 FO393413.1-201ENST00000402892 195 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AC112220.1-201ENST00000434628 355 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.63□□□□□ -1.99
PKNOX1P55347 COX7BP2-201ENST00000437976 242 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.63□□□□□ -1.99
PKNOX1P55347 PTENP1-201ENST00000447117 1215 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.63□□□□□ -1.99
PKNOX1P55347 USP9YP25-201ENST00000457708 443 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 AC090525.1-201ENST00000479116 478 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 RPL30P5-201ENST00000494923 336 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 AC104090.1-201ENST00000506341 1171 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 SEM1P1-201ENST00000506694 209 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AC026801.2-201ENST00000515352 425 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.63□□□□□ -1.99
PKNOX1P55347 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AL132857.1-201ENST00000555180 708 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PKNOX1P55347 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AC138761.3-201ENST00000579993 334 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 AC022662.1-201ENST00000580252 331 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.63□□□□□ -1.99
PKNOX1P55347 MIR3670-2-201ENST00000582974 65 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 MIR3670-1-201ENST00000584160 65 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 MIR3670-3-201ENST00000584855 65 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AC009974.1-201ENST00000608881 455 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 MIR3670-4-201ENST00000612260 65 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 ATP5A1P2-202ENST00000616464 443 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.63□□□□□ -1.99
PKNOX1P55347 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.63□□□□□ -1.99
PKNOX1P55347 AC106754.1-201ENST00000562632 1513 ntBASIC2.63□□□□□ -1.99
PKNOX1P55347 AC010680.1-201ENST00000590024 3590 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 TPTE2P4-201ENST00000258589 1605 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PKNOX1P55347 RNU5A-1-201ENST00000362698 116 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 RNU6-289P-201ENST00000364093 107 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AL138827.1-201ENST00000402666 306 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AL139095.1-201ENST00000404326 391 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX1P55347 USP9YP33-201ENST00000412220 421 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.62□□□□□ -1.99
PKNOX1P55347 USP9YP35-201ENST00000435696 412 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.62□□□□□ -1.99
PKNOX1P55347 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX1P55347 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX1P55347 USP9YP10-201ENST00000454868 628 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AC010099.1-201ENST00000455434 375 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX1P55347 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX1P55347 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX1P55347 AC009901.1-201ENST00000506703 541 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
PKNOX1P55347 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX1P55347 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.62□□□□□ -1.99
PKNOX1P55347 AP000867.2-201ENST00000532468 320 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX1P55347 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX1P55347 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.62□□□□□ -1.99
PKNOX1P55347 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.62□□□□□ -1.99
PKNOX1P55347 MIR4325-201ENST00000583049 90 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.62□□□□□ -1.99
PKNOX1P55347 AC013553.2-201ENST00000604244 589 ntBASIC2.62□□□□□ -1.99
PKNOX1P55347 AC019159.1-201ENST00000605094 187 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms