Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 U3.39-201ENST00000408569 239 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 RN7SKP111-201ENST00000410349 271 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 RAD23BP2-201ENST00000416003 1207 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLCNKAP51800 ISCA1P6-201ENST00000427740 390 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCNKAP51800 OR4K11P-201ENST00000431829 904 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 AC073063.1-201ENST00000434352 607 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.5□□□□□ -1.85
CLCNKAP51800 AC009961.2-201ENST00000435771 251 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCNKAP51800 UBE2V1P13-201ENST00000436983 439 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.5□□□□□ -1.85
CLCNKAP51800 RPL23AP14-201ENST00000468281 468 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 AC010285.1-201ENST00000470580 392 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 AC055855.1-201ENST00000489563 579 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.5□□□□□ -1.85
CLCNKAP51800 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.5□□□□□ -1.85
CLCNKAP51800 RNU6-430P-201ENST00000517078 107 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CLCNKAP51800 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCNKAP51800 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCNKAP51800 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.5□□□□□ -1.85
CLCNKAP51800 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCNKAP51800 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCNKAP51800 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.5□□□□□ -1.85
CLCNKAP51800 MIR3186-201ENST00000577404 85 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 MIR4474-201ENST00000579189 78 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 MIR5047-201ENST00000579212 100 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 MIR3922-201ENST00000585192 84 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 AC011451.2-201ENST00000604303 598 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 AL031176.1-201ENST00000604554 466 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 AL161729.4-201ENST00000604650 476 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCNKAP51800 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCNKAP51800 AC109347.2-201ENST00000610220 349 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 AC019176.2-201ENST00000611579 315 ntBASIC3.5□□□□□ -1.85
CLCNKAP51800 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCNKAP51800 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCNKAP51800 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCNKAP51800 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CLCNKAP51800 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCNKAP51800 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCNKAP51800 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCNKAP51800 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCNKAP51800 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCNKAP51800 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCNKAP51800 AC005183.1-201ENST00000603687 1979 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCNKAP51800 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCNKAP51800 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCNKAP51800 DEFB109C-201ENST00000382575 264 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 DEFB109B-201ENST00000382656 264 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 RNU6-259P-201ENST00000383999 107 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCNKAP51800 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCNKAP51800 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCNKAP51800 BX295541.1-201ENST00000417774 250 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 TOMM22P1-201ENST00000418578 312 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 DBIP2-201ENST00000419076 262 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 USP9YP36-201ENST00000424581 829 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AC006989.1-201ENST00000427212 131 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCNKAP51800 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCNKAP51800 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCNKAP51800 TPT1P14-201ENST00000448018 505 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCNKAP51800 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.49□□□□□ -1.85
CLCNKAP51800 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.49□□□□□ -1.85
CLCNKAP51800 RN7SL293P-201ENST00000481765 281 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AL358832.1-201ENST00000497800 389 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AC020893.1-201ENST00000502452 580 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.49□□□□□ -1.85
CLCNKAP51800 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCNKAP51800 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCNKAP51800 Y_RNA.672-201ENST00000516289 104 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 RNU6-798P-201ENST00000516912 103 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 SNORA31.20-201ENST00000517111 133 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AC008489.1-201ENST00000524271 483 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.49□□□□□ -1.85
CLCNKAP51800 AC016957.1-201ENST00000534895 309 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCNKAP51800 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCNKAP51800 AC010546.1-201ENST00000569391 485 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCNKAP51800 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCNKAP51800 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCNKAP51800 XIAPP1-201ENST00000603162 600 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 RNU6-87P-201ENST00000607561 108 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCNKAP51800 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCNKAP51800 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 U4.6-201ENST00000621618 127 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AL357559.1-201ENST00000622228 274 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AC091953.2-201ENST00000623979 160 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 AL159972.1-201ENST00000625150 448 ntBASIC3.49□□□□□ -1.85
CLCNKAP51800 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCNKAP51800 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CLCNKAP51800 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCNKAP51800 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms