Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MIR26A1-201ENST00000362205 77 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 RNA5SP167-201ENST00000365461 116 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 SNORD116-8-201ENST00000384365 95 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 U3.26-201ENST00000391236 204 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AL360182.1-201ENST00000397433 468 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 RN7SKP266-201ENST00000410232 287 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 RNA5SP21-201ENST00000410917 96 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD4P46934 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD4P46934 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.22□□□□□ -1.89
NEDD4P46934 AC007390.1-201ENST00000415722 356 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 MTCO3P12-201ENST00000416718 547 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.22□□□□□ -1.89
NEDD4P46934 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD4P46934 AL590103.1-201ENST00000434488 307 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.22□□□□□ -1.89
NEDD4P46934 AC002381.1-201ENST00000447049 280 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD4P46934 RPL7P52-201ENST00000449200 742 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.22□□□□□ -1.89
NEDD4P46934 RPS20P32-201ENST00000456044 356 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 BZW1P2-201ENST00000473537 826 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AC023424.2-201ENST00000493479 777 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD4P46934 AC005921.1-201ENST00000510589 286 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD4P46934 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.22□□□□□ -1.89
NEDD4P46934 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD4P46934 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.22□□□□□ -1.89
NEDD4P46934 OR5D17P-201ENST00000531492 978 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AC068587.4-201ENST00000533893 186 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AL355836.1-201ENST00000555951 870 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AC006270.2-201ENST00000578523 652 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AC138761.3-201ENST00000579993 334 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.22□□□□□ -1.89
NEDD4P46934 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD4P46934 AP000676.3-201ENST00000623299 569 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AL356596.1-201ENST00000624230 379 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 PCMTD1P7-201ENST00000634506 357 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.22□□□□□ -1.89
NEDD4P46934 CRYM-AS1-204ENST00000637983 556 ntBASIC3.22□□□□□ -1.89
NEDD4P46934 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NEDD4P46934 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NEDD4P46934 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NEDD4P46934 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
NEDD4P46934 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NEDD4P46934 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
NEDD4P46934 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NEDD4P46934 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NEDD4P46934 RNU6-500P-201ENST00000362349 107 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 MIR1305-201ENST00000408300 86 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.21□□□□□ -1.89
NEDD4P46934 RNA5SP129-201ENST00000410276 118 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.21□□□□□ -1.89
NEDD4P46934 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.21□□□□□ -1.89
NEDD4P46934 AC099677.1-201ENST00000420575 175 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.21□□□□□ -1.89
NEDD4P46934 AL139281.1-201ENST00000422120 335 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.21□□□□□ -1.89
NEDD4P46934 MTND4LP10-201ENST00000435146 291 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 AC108938.1-201ENST00000451204 136 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 AL353691.1-201ENST00000451332 387 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.21□□□□□ -1.89
NEDD4P46934 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.21□□□□□ -1.89
NEDD4P46934 ARPC3P2-201ENST00000457786 533 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 RNU7-125P-201ENST00000458760 62 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 snoU13.8-201ENST00000458890 104 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 AC078918.1-201ENST00000498515 228 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 VN1R104P-201ENST00000505115 1009 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
NEDD4P46934 AC034159.1-201ENST00000513885 583 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 MTND5P4-201ENST00000514978 288 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 RNA5SP385-201ENST00000515947 110 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
NEDD4P46934 AP004371.1-201ENST00000525240 214 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.21□□□□□ -1.89
NEDD4P46934 AC090888.1-201ENST00000561335 1141 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 MIR4319-201ENST00000577285 85 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.21□□□□□ -1.89
NEDD4P46934 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 AC099778.2-201ENST00000610904 211 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 XIST_intron.1-201ENST00000619444 68 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 AC018755.4-201ENST00000619715 454 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 AL356585.4-201ENST00000623078 1229 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.21□□□□□ -1.89
NEDD4P46934 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.21□□□□□ -1.89
NEDD4P46934 AC138649.5-201ENST00000637456 137 ntBASIC3.21□□□□□ -1.89
NEDD4P46934 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NEDD4P46934 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.21□□□□□ -1.9
NEDD4P46934 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
NEDD4P46934 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.21□□□□□ -1.9
NEDD4P46934 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
NEDD4P46934 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
NEDD4P46934 AC004925.1-201ENST00000624256 2706 ntBASIC3.21□□□□□ -1.9
NEDD4P46934 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
NEDD4P46934 RNU6-433P-201ENST00000363216 104 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 Y_RNA.169-201ENST00000363745 96 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 SNORA7.2-201ENST00000364446 145 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 RNU6-7-201ENST00000364784 107 ntBASIC3.2□□□□□ -1.9
NEDD4P46934 RNU6-8-201ENST00000365467 107 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms