Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL390208.1-201ENST00000605885 644 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AC024560.3-201ENST00000608482 349 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AC093673.2-201ENST00000609674 331 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AC011890.2-201ENST00000613393 294 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AC090132.2-201ENST00000615881 347 ntBASIC2.56□□□□□ -2
SLC1A1P43005 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.56□□□□□ -2
SLC1A1P43005 AC099654.7-201ENST00000635788 2127 ntBASIC2.56□□□□□ -2
SLC1A1P43005 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
SLC1A1P43005 snoZ40.1-201ENST00000364540 72 ntBASIC2.55□□□□□ -2
SLC1A1P43005 RNU6-7-201ENST00000364784 107 ntBASIC2.55□□□□□ -2
SLC1A1P43005 RNU6-8-201ENST00000365467 107 ntBASIC2.55□□□□□ -2
SLC1A1P43005 RNU6-224P-201ENST00000384055 107 ntBASIC2.55□□□□□ -2
SLC1A1P43005 RNU6-76P-201ENST00000384060 104 ntBASIC2.55□□□□□ -2
SLC1A1P43005 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.55□□□□□ -2
SLC1A1P43005 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.55□□□□□ -2
SLC1A1P43005 AC090774.1-201ENST00000435925 246 ntBASIC2.55□□□□□ -2
SLC1A1P43005 MTND2P20-201ENST00000440805 661 ntBASIC2.55□□□□□ -2
SLC1A1P43005 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.55□□□□□ -2
SLC1A1P43005 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.55□□□□□ -2
SLC1A1P43005 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.55□□□□□ -2
SLC1A1P43005 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.55□□□□□ -2
SLC1A1P43005 AC108734.3-201ENST00000481241 1165 ntBASIC2.55□□□□□ -2
SLC1A1P43005 AL049874.1-201ENST00000489560 388 ntBASIC2.55□□□□□ -2
SLC1A1P43005 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLC1A1P43005 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.55□□□□□ -2
SLC1A1P43005 AC026801.2-201ENST00000515352 425 ntBASIC2.55□□□□□ -2
SLC1A1P43005 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.55□□□□□ -2
SLC1A1P43005 RNU6-928P-201ENST00000516876 104 ntBASIC2.55□□□□□ -2
SLC1A1P43005 SNORA31.22-201ENST00000517204 135 ntBASIC2.55□□□□□ -2
SLC1A1P43005 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.55□□□□□ -2
SLC1A1P43005 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.55□□□□□ -2
SLC1A1P43005 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLC1A1P43005 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.55□□□□□ -2
SLC1A1P43005 AC008739.2-201ENST00000597006 317 ntBASIC2.55□□□□□ -2
SLC1A1P43005 AC005000.2-201ENST00000605468 310 ntBASIC2.55□□□□□ -2
SLC1A1P43005 OR2AS2P-201ENST00000606902 342 ntBASIC2.55□□□□□ -2
SLC1A1P43005 AC067747.1-201ENST00000608026 250 ntBASIC2.55□□□□□ -2
SLC1A1P43005 AC009237.15-201ENST00000610252 501 ntBASIC2.55□□□□□ -2
SLC1A1P43005 AC023158.2-201ENST00000614876 543 ntBASIC2.55□□□□□ -2
SLC1A1P43005 AL590099.1-201ENST00000615276 138 ntBASIC2.55□□□□□ -2
SLC1A1P43005 AL161629.2-201ENST00000615347 275 ntBASIC2.55□□□□□ -2
SLC1A1P43005 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SLC1A1P43005 AC079597.1-201ENST00000624306 508 ntBASIC2.55□□□□□ -2
SLC1A1P43005 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.55□□□□□ -2
SLC1A1P43005 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SLC1A1P43005 AC010680.1-201ENST00000590024 3590 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AL356473.1-201ENST00000406203 1408 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AC093536.2-201ENST00000565257 1406 ntBASIC2.54□□□□□ -2
SLC1A1P43005 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.54□□□□□ -2
SLC1A1P43005 RNU6-28P-201ENST00000362378 107 ntBASIC2.54□□□□□ -2
SLC1A1P43005 SNORD114-30-201ENST00000364448 72 ntBASIC2.54□□□□□ -2
SLC1A1P43005 RNU6-1180P-201ENST00000364935 107 ntBASIC2.54□□□□□ -2
SLC1A1P43005 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLC1A1P43005 Y_RNA.408-201ENST00000383987 102 ntBASIC2.54□□□□□ -2
SLC1A1P43005 SNORA40.4-201ENST00000390971 128 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AL031679.1-201ENST00000400616 525 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AL359511.1-201ENST00000402970 211 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AC096664.2-201ENST00000411843 406 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.54□□□□□ -2
SLC1A1P43005 RPL7P37-201ENST00000425095 738 ntBASIC2.54□□□□□ -2
SLC1A1P43005 TAAR7P-201ENST00000436141 242 ntBASIC2.54□□□□□ -2
SLC1A1P43005 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.54□□□□□ -2
SLC1A1P43005 AC009237.8-201ENST00000445492 379 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLC1A1P43005 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.54□□□□□ -2
SLC1A1P43005 HSPE1P6-201ENST00000479457 291 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AC069528.1-202ENST00000482888 637 ntBASIC2.54□□□□□ -2
SLC1A1P43005 RPL36AP51-201ENST00000487216 318 ntBASIC2.54□□□□□ -2
SLC1A1P43005 MTCYBP17-201ENST00000503579 789 ntBASIC2.54□□□□□ -2
SLC1A1P43005 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.54□□□□□ -2
SLC1A1P43005 AC069306.1-201ENST00000507006 843 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AC112673.1-201ENST00000513168 575 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.54□□□□□ -2
SLC1A1P43005 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.54□□□□□ -2
SLC1A1P43005 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.54□□□□□ -2
SLC1A1P43005 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.54□□□□□ -2
SLC1A1P43005 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLC1A1P43005 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.54□□□□□ -2
SLC1A1P43005 HMGB1P14-201ENST00000557424 591 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.54□□□□□ -2
SLC1A1P43005 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AC090615.1-201ENST00000577519 154 ntBASIC2.54□□□□□ -2
SLC1A1P43005 VN1R78P-201ENST00000597393 564 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AP001429.1-201ENST00000602568 530 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AL035413.2-201ENST00000604801 525 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AP003476.1-201ENST00000623984 516 ntBASIC2.54□□□□□ -2
SLC1A1P43005 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.54□□□□□ -2
SLC1A1P43005 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.54□□□□□ -2
SLC1A1P43005 OR5H6-203ENST00000642105 978 ntBASIC2.54□□□□□ -2
SLC1A1P43005 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SLC1A1P43005 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.54□□□□□ -2
SLC1A1P43005 AC005539.1-201ENST00000443768 1479 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SLC1A1P43005 AC005832.2-201ENST00000538921 1430 ntBASIC2.53□□□□□ -2
SLC1A1P43005 MIR21-201ENST00000362134 72 ntBASIC2.53□□□□□ -2
SLC1A1P43005 RNU6-270P-201ENST00000364131 105 ntBASIC2.53□□□□□ -2
SLC1A1P43005 RNU6-1122P-201ENST00000384449 107 ntBASIC2.53□□□□□ -2
SLC1A1P43005 MIR325-201ENST00000385260 98 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms