Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXD13P35453 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HOXD13P35453 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXD13P35453 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD13P35453 AC005183.1-201ENST00000603687 1979 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD13P35453 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD13P35453 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD13P35453 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD13P35453 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXD13P35453 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HOXD13P35453 RNU5A-8P-201ENST00000364102 114 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 RNA5SP267-201ENST00000364893 126 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 RNU1-101P-201ENST00000391171 127 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 AL031577.2-201ENST00000404133 280 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 CCNG1P1-201ENST00000406783 885 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 RPL21P24-201ENST00000413752 448 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 BX890604.2-201ENST00000427883 474 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXD13P35453 CETN4P-201ENST00000432407 469 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 AL353705.1-201ENST00000433468 480 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD13P35453 AC115115.1-201ENST00000449927 248 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD13P35453 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXD13P35453 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXD13P35453 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXD13P35453 AC006445.2-201ENST00000510061 472 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 OR5BM1P-201ENST00000512021 366 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXD13P35453 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD13P35453 ATP5F1P5-201ENST00000526403 760 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.54□□□□□ -1.84
HOXD13P35453 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXD13P35453 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD13P35453 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXD13P35453 HMGB1P14-201ENST00000557424 591 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXD13P35453 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXD13P35453 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXD13P35453 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD13P35453 AC073657.2-201ENST00000605661 303 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 AC069200.1-201ENST00000609511 323 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 AL392048.1-201ENST00000613946 534 ntBASIC3.54□□□□□ -1.84
HOXD13P35453 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD13P35453 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD13P35453 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD13P35453 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD13P35453 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXD13P35453 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HOXD13P35453 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD13P35453 AL445523.1-201ENST00000451184 1362 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXD13P35453 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD13P35453 AC233263.6-201ENST00000631132 1963 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD13P35453 Y_RNA.46-201ENST00000362695 102 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 Y_RNA.97-201ENST00000363094 102 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 RNU6-920P-201ENST00000410926 92 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 RN7SKP140-201ENST00000411196 284 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 RPL17P12-201ENST00000413391 526 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD13P35453 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD13P35453 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD13P35453 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD13P35453 MTND1P30-201ENST00000441241 901 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD13P35453 ZNF114P1-201ENST00000453500 292 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 RNU6-420P-201ENST00000458780 107 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 KCTD9P5-201ENST00000504141 1170 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 RNU6-1282P-201ENST00000516735 96 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD13P35453 CASP1P1-201ENST00000526345 212 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 DEFB108A-201ENST00000530110 222 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXD13P35453 AC004024.1-201ENST00000549244 247 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 AC093012.1-202ENST00000549403 582 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 AC011611.1-201ENST00000552179 197 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.53□□□□□ -1.84
HOXD13P35453 AC002545.1-201ENST00000592511 181 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 AC013553.2-201ENST00000604244 589 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 AC120349.3-201ENST00000624377 529 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 AC022336.2-201ENST00000568966 2538 ntBASIC3.53□□□□□ -1.84
HOXD13P35453 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HOXD13P35453 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXD13P35453 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXD13P35453 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD13P35453 AC007785.2-201ENST00000598627 1916 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXD13P35453 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD13P35453 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXD13P35453 SNORD56.3-201ENST00000363507 71 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXD13P35453 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
HOXD13P35453 RNU6-741P-201ENST00000383889 107 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 RNU1-39P-201ENST00000383897 165 ntBASIC3.52□□□□□ -1.85
HOXD13P35453 RNU6-809P-201ENST00000384461 107 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms