Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SNRPGP3-201ENST00000469405 227 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC079203.1-201ENST00000487972 404 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 RPL21P131-201ENST00000497298 483 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.1□□□□□ -2.07
COL5A1P20908 POLR2KP1-201ENST00000553226 168 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.1□□□□□ -2.07
COL5A1P20908 AC009094.1-201ENST00000564443 426 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 MIR4458-201ENST00000578872 75 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
COL5A1P20908 AP001269.3-201ENST00000588718 329 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 VN1R74P-201ENST00000613259 503 ntBASIC2.1□□□□□ -2.07
COL5A1P20908 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.1□□□□□ -2.07
COL5A1P20908 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.1□□□□□ -2.07
COL5A1P20908 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.1□□□□□ -2.07
COL5A1P20908 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL5A1P20908 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
COL5A1P20908 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
COL5A1P20908 MIR525-201ENST00000384978 85 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 DNAJC19P6-201ENST00000401853 280 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 RNU2-2P-201ENST00000410396 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.09□□□□□ -2.08
COL5A1P20908 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.09□□□□□ -2.08
COL5A1P20908 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.09□□□□□ -2.08
COL5A1P20908 RPL7P29-201ENST00000437151 728 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 RPS26P30-201ENST00000443431 335 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 ARL5AP2-201ENST00000444698 533 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 MTCYBP11-201ENST00000447254 1109 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 RNU6-1218P-201ENST00000458990 108 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 VPS26AP1-201ENST00000483197 979 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.09□□□□□ -2.08
COL5A1P20908 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.09□□□□□ -2.08
COL5A1P20908 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.09□□□□□ -2.08
COL5A1P20908 MTCO1P30-201ENST00000515244 580 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 PRELID3BP4-201ENST00000515476 571 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.09□□□□□ -2.08
COL5A1P20908 DEFB130C-202ENST00000530001 230 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.09□□□□□ -2.08
COL5A1P20908 MTCO2P15-201ENST00000532655 656 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.09□□□□□ -2.08
COL5A1P20908 MRPS36P5-201ENST00000551909 298 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AC023813.2-201ENST00000564321 469 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AC012182.1-201ENST00000570133 895 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 ZNF92P3-201ENST00000596594 954 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.09□□□□□ -2.08
COL5A1P20908 AC007687.1-201ENST00000602704 304 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.6-201ENST00000603753 252 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.11-201ENST00000604059 253 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.10-201ENST00000604330 253 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AC008162.1-201ENST00000604718 254 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.1-201ENST00000604752 252 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.2-201ENST00000604983 252 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.5-201ENST00000605253 252 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.4-201ENST00000605279 254 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.12-201ENST00000605291 253 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AC128687.1-201ENST00000605304 619 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.8-201ENST00000605353 252 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.9-201ENST00000605428 253 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL670379.7-201ENST00000605823 252 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.09□□□□□ -2.08
COL5A1P20908 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.09□□□□□ -2.08
COL5A1P20908 AC097478.2-201ENST00000610572 514 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.15-201ENST00000611544 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.16-201ENST00000613119 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.12-201ENST00000613778 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.20-201ENST00000613956 192 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.9-201ENST00000615427 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.11-201ENST00000616345 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.2-201ENST00000616535 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.3-201ENST00000617785 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 FRG1HP-204ENST00000617940 757 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U6.48-201ENST00000618523 106 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.19-201ENST00000618602 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 RNU2-1-201ENST00000618664 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AL158163.2-201ENST00000619110 700 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.6-201ENST00000619225 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.5-201ENST00000619465 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 U2.10-201ENST00000620268 191 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 YWHAEP7-203ENST00000622054 312 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 AC244517.12-201ENST00000623581 663 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.09□□□□□ -2.08
COL5A1P20908 LINC02211-204ENST00000642024 1070 ntBASIC2.09□□□□□ -2.08
COL5A1P20908 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
COL5A1P20908 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL5A1P20908 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL5A1P20908 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL5A1P20908 RNA5SP167-201ENST00000365461 116 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 RNU5A-2P-201ENST00000384337 116 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.08□□□□□ -2.08
COL5A1P20908 RAD23BP2-201ENST00000416003 1207 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.08□□□□□ -2.08
COL5A1P20908 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.08□□□□□ -2.08
COL5A1P20908 MTCYBP42-201ENST00000444653 1130 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 AC004022.1-201ENST00000447766 1066 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.08□□□□□ -2.08
COL5A1P20908 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
COL5A1P20908 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.08□□□□□ -2.08
COL5A1P20908 BOLA3P3-201ENST00000505182 232 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
COL5A1P20908 snoZ278.1-201ENST00000517059 112 ntBASIC2.08□□□□□ -2.08
COL5A1P20908 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms